Protein–RNA interactions for Protein: Q6ZSB3

LINC00299, Putative uncharacterized protein encoded by LINC00299, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299Q6ZSB3 AL034408.1-202ENST00000636088 415 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 MTCO1P8-201ENST00000416914 1523 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 Z82209.1-201ENST00000422141 2135 ntBASIC2.11□□□□□ -2.07
LINC00299Q6ZSB3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 SNORA58B-201ENST00000364259 136 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 SNORA51.2-201ENST00000364595 132 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 RNU6-673P-201ENST00000365084 104 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 RNU6-317P-201ENST00000384031 107 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 SNORD65-201ENST00000391079 73 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 RAB9AP3-201ENST00000412737 573 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 RPS29P4-201ENST00000414733 161 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 AC241520.1-201ENST00000422654 1099 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 MYL8P-204ENST00000431574 518 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 AL035246.1-201ENST00000433554 1255 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 RAB9AP1-201ENST00000449393 573 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 AL445669.2-201ENST00000454425 421 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 NECAP1P2-201ENST00000455668 727 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 TRBV26-201ENST00000456572 344 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 RN7SKP40-201ENST00000517211 242 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 AC026403.1-201ENST00000518938 295 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 AC084824.1-201ENST00000550917 1005 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 AC103798.2-201ENST00000624292 632 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 AC079597.1-201ENST00000624306 508 ntBASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.1□□□□□ -2.07
LINC00299Q6ZSB3 AC087565.3-202ENST00000642085 1603 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 RNA5SP68-201ENST00000363885 119 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 AL591416.1-201ENST00000404015 867 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 RNU2-65P-201ENST00000410162 185 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 AC007064.1-201ENST00000412238 351 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 AL513477.1-202ENST00000417061 214 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 TPT1P13-201ENST00000449760 499 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 TPMTP4-201ENST00000450749 678 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 RNU6-717P-201ENST00000459076 104 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 AC025033.1-201ENST00000463883 194 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 AC009812.2-201ENST00000517657 457 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 AC010306.1-201ENST00000523223 1117 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 MIR4448-201ENST00000584360 86 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 AC061975.8-201ENST00000587058 721 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 AC124312.4-201ENST00000605533 310 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 DUXAP9-208ENST00000622815 614 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 AC010435.1-201ENST00000623353 1177 ntBASIC2.09□□□□□ -2.07
LINC00299Q6ZSB3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
LINC00299Q6ZSB3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.09□□□□□ -2.08
LINC00299Q6ZSB3 AL359715.4-201ENST00000606629 1436 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 ZNF33CP-201ENST00000432492 2030 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 AC026241.1-201ENST00000517873 2142 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 MTND5P3-201ENST00000438536 1800 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 RNA5SP138-201ENST00000365098 114 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 RNU6-356P-201ENST00000384140 107 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 ATP5F1P3-201ENST00000397213 657 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 U3.40-201ENST00000408706 208 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 SRIP2-201ENST00000428470 166 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 CKS1BP5-201ENST00000434172 273 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 RPL31P53-201ENST00000457065 348 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 RBM43P1-201ENST00000476891 1081 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 AC091959.2-201ENST00000477363 321 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 CDC42P4-201ENST00000510507 563 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 AC008413.1-201ENST00000511864 177 ntBASIC2.08□□□□□ -2.08
LINC00299Q6ZSB3 RNU4-18P-201ENST00000516751 149 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms