Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.74□□□□□ -1.33
RC3H1Q5TC82 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
RC3H1Q5TC82 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 RNU1-32P-201ENST00000363937 159 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 Y_RNA.210-201ENST00000364161 110 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 Y_RNA.428-201ENST00000384078 102 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 Y_RNA.785-201ENST00000384290 109 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 UBE2V1P2-201ENST00000397758 440 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AC096632.1-201ENST00000427395 310 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 REG1CP-206ENST00000447469 496 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 RNU6-1016P-201ENST00000516689 94 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AC021006.3-201ENST00000530771 192 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 OR4P1P-201ENST00000530808 1136 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AC024224.1-201ENST00000538284 609 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AC128657.1-201ENST00000549459 145 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AC008745.1-201ENST00000604064 271 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 MIR6128-201ENST00000615528 109 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AC010378.1-201ENST00000619270 362 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 AL137141.1-201ENST00000624622 4836 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 PROS2P-201ENST00000474651 1951 ntBASIC6.73□□□□□ -1.33
RC3H1Q5TC82 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.73□□□□□ -1.33
RC3H1Q5TC82 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AC083899.1-201ENST00000454465 3819 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 HSPD1P8-201ENST00000400121 1658 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 SNORA62.1-201ENST00000364287 154 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 RNU6-39P-201ENST00000384344 107 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AL391417.1-201ENST00000404100 426 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AL136131.1-201ENST00000406079 803 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AL133482.1-201ENST00000415988 498 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AL590135.1-201ENST00000422215 156 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 PDSS1P1-201ENST00000422953 1114 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 COX6CP15-201ENST00000426313 211 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 RPS24P8-201ENST00000431490 402 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AC091390.1-201ENST00000433904 331 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 MTATP6P16-201ENST00000434543 526 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AL451139.1-201ENST00000434718 346 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 RHOT1P3-201ENST00000436571 331 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AL031663.1-201ENST00000437445 219 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 RPL7P28-201ENST00000437739 740 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AL118520.1-201ENST00000450770 291 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AP000797.2-201ENST00000475768 606 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AC090453.1-201ENST00000495560 436 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AC026784.1-201ENST00000507986 352 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 RNU6-475P-201ENST00000516073 104 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AC022868.1-201ENST00000517767 391 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AP003385.6-201ENST00000531603 374 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms