Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 Y_RNA.5-201ENST00000362334 102 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 Y_RNA.193-201ENST00000363979 102 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 RNU6-310P-201ENST00000384655 107 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDH1Q08174 AL360182.1-201ENST00000397433 468 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 AL009179.1-201ENST00000406085 265 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 RNA5SP107-201ENST00000411358 122 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH1Q08174 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH1Q08174 RPL23AP38-201ENST00000423801 469 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 RAC1P6-201ENST00000423911 575 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH1Q08174 Z95327.1-201ENST00000446082 482 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDH1Q08174 RPS17P13-201ENST00000448974 407 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 AL445665.1-202ENST00000452436 324 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 HLA-DPA3-207ENST00000454398 229 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 RN7SL72P-201ENST00000460697 269 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
PCDH1Q08174 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDH1Q08174 AC079140.5-201ENST00000507882 310 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 AC002456.2-201ENST00000509356 380 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 AC114781.3-201ENST00000512083 142 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 AC016065.2-201ENST00000514530 444 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDH1Q08174 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDH1Q08174 IGBP1P1-201ENST00000554337 1009 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDH1Q08174 AC008269.2-201ENST00000561915 1105 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDH1Q08174 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDH1Q08174 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDH1Q08174 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDH1Q08174 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 AC012443.1-201ENST00000605605 231 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 AC138965.3-201ENST00000623875 498 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH1Q08174 TPTE2P4-201ENST00000258589 1605 ntBASIC5.41□□□□□ -1.54
PCDH1Q08174 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PCDH1Q08174 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDH1Q08174 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDH1Q08174 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDH1Q08174 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PCDH1Q08174 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH1Q08174 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH1Q08174 API5P2-201ENST00000397055 1498 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH1Q08174 OR52B3P-201ENST00000314715 928 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH1Q08174 RNU6-1115P-201ENST00000362490 106 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 Y_RNA.149-201ENST00000363558 117 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 RN7SKP292-201ENST00000365522 317 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH1Q08174 SNORD116-11-201ENST00000383882 92 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 RNU6-1040P-201ENST00000383974 107 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 U3.29-201ENST00000391296 212 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH1Q08174 MRPL42P3-201ENST00000401492 326 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH1Q08174 MCFD2P1-201ENST00000417812 300 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDH1Q08174 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDH1Q08174 AC113412.1-201ENST00000425840 504 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 AL160004.2-201ENST00000432935 350 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH1Q08174 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDH1Q08174 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH1Q08174 NDUFB4P8-201ENST00000435351 367 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 RPL23AP89-201ENST00000439324 255 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 AC005094.1-201ENST00000440420 368 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 SNORD97-201ENST00000459187 142 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDH1Q08174 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDH1Q08174 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDH1Q08174 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDH1Q08174 AC091912.1-201ENST00000511351 248 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 RNU6-615P-201ENST00000516065 106 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 RNU6-189P-201ENST00000516120 101 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 AC135001.1-201ENST00000544546 283 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.4□□□□□ -1.54
PCDH1Q08174 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH1Q08174 MIR4293-201ENST00000584305 78 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 MIR7853-201ENST00000584820 132 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 AC025574.2-201ENST00000615621 514 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 MIR6133-201ENST00000617057 108 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 AC103705.1-201ENST00000619013 241 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDH1Q08174 U4.1-201ENST00000620349 87 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 AL022311.1-201ENST00000623726 19416 ntBASIC5.4□□□□□ -1.54
PCDH1Q08174 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH1Q08174 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH1Q08174 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH1Q08174 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
PCDH1Q08174 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
PCDH1Q08174 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH1Q08174 AC007938.2-201ENST00000604666 2634 ntBASIC5.4□□□□□ -1.55
PCDH1Q08174 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDH1Q08174 AC090337.1-201ENST00000579651 2074 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms