Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC117522.3-201ENST00000507974 584 ntBASIC1.71□□□□□ -2.14
RPS28P62857 CDV3-208ENST00000511392 554 ntTSL 5 BASIC1.71□□□□□ -2.14
RPS28P62857 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC1.71□□□□□ -2.14
RPS28P62857 Y_RNA.667-201ENST00000516212 107 ntBASIC1.71□□□□□ -2.14
RPS28P62857 RNA5SP438-201ENST00000516561 112 ntBASIC1.71□□□□□ -2.14
RPS28P62857 RNU6-798P-201ENST00000516912 103 ntBASIC1.71□□□□□ -2.14
RPS28P62857 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.71□□□□□ -2.14
RPS28P62857 AC131935.1-201ENST00000524621 333 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.71□□□□□ -2.14
RPS28P62857 AP000676.2-201ENST00000529711 301 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.71□□□□□ -2.14
RPS28P62857 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.71□□□□□ -2.14
RPS28P62857 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.71□□□□□ -2.14
RPS28P62857 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC1.71□□□□□ -2.14
RPS28P62857 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC1.71□□□□□ -2.14
RPS28P62857 AC068790.7-201ENST00000602347 528 ntBASIC1.71□□□□□ -2.14
RPS28P62857 HCG18-243ENST00000602498 327 ntTSL 3 BASIC1.71□□□□□ -2.14
RPS28P62857 APOOP1-201ENST00000604695 592 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AL450336.1-201ENST00000605180 586 ntBASIC1.71□□□□□ -2.14
RPS28P62857 ATP1B3P1-201ENST00000605365 821 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AC124312.4-201ENST00000605533 310 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AC010245.2-201ENST00000606908 1167 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AC011374.2-201ENST00000607135 526 ntBASIC1.71□□□□□ -2.14
RPS28P62857 AL161423.1-201ENST00000613700 262 ntBASIC1.71□□□□□ -2.14
RPS28P62857 RDM1-219ENST00000615378 542 ntTSL 3 BASIC1.71□□□□□ -2.14
RPS28P62857 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
RPS28P62857 CR381653.2-201ENST00000624041 768 ntBASIC1.71□□□□□ -2.14
RPS28P62857 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.71□□□□□ -2.14
RPS28P62857 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC1.71□□□□□ -2.14
RPS28P62857 OR5H6-203ENST00000642105 978 ntBASIC1.71□□□□□ -2.14
RPS28P62857 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPS28P62857 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPS28P62857 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
RPS28P62857 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
RPS28P62857 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RPS28P62857 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
RPS28P62857 FRG1BP-201ENST00000278882 761 ntBASIC1.7□□□□□ -2.14
RPS28P62857 RNU4-23P-201ENST00000362839 140 ntBASIC1.7□□□□□ -2.14
RPS28P62857 RNU6-270P-201ENST00000364131 105 ntBASIC1.7□□□□□ -2.14
RPS28P62857 MIR659-201ENST00000384963 97 ntBASIC1.7□□□□□ -2.14
RPS28P62857 RNU6ATAC5P-201ENST00000388104 126 ntBASIC1.7□□□□□ -2.14
RPS28P62857 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPS28P62857 RSL24D1P1-201ENST00000404972 493 ntBASIC1.7□□□□□ -2.14
RPS28P62857 NRBF2P2-201ENST00000413087 861 ntBASIC1.7□□□□□ -2.14
RPS28P62857 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC1.7□□□□□ -2.14
RPS28P62857 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC1.7□□□□□ -2.14
RPS28P62857 Z82198.3-201ENST00000421145 199 ntBASIC1.7□□□□□ -2.14
RPS28P62857 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.7□□□□□ -2.14
RPS28P62857 AC012497.1-201ENST00000429392 575 ntBASIC1.7□□□□□ -2.14
RPS28P62857 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.7□□□□□ -2.14
RPS28P62857 MYL8P-204ENST00000431574 518 ntBASIC1.7□□□□□ -2.14
RPS28P62857 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
RPS28P62857 Z85994.2-201ENST00000434327 452 ntBASIC1.7□□□□□ -2.14
RPS28P62857 RPL23AP74-201ENST00000437246 471 ntBASIC1.7□□□□□ -2.14
RPS28P62857 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC1.7□□□□□ -2.14
RPS28P62857 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC1.7□□□□□ -2.14
RPS28P62857 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC1.7□□□□□ -2.14
RPS28P62857 RPL21P13-201ENST00000488305 481 ntBASIC1.7□□□□□ -2.14
RPS28P62857 GAPDHP56-201ENST00000506031 988 ntBASIC1.7□□□□□ -2.14
RPS28P62857 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RPS28P62857 AC023141.11-201ENST00000508864 202 ntBASIC1.7□□□□□ -2.14
RPS28P62857 AL359273.1-201ENST00000510918 627 ntBASIC1.7□□□□□ -2.14
RPS28P62857 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RPS28P62857 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC1.7□□□□□ -2.14
RPS28P62857 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.7□□□□□ -2.14
RPS28P62857 OR5H7P-201ENST00000514084 930 ntBASIC1.7□□□□□ -2.14
RPS28P62857 RNA5SP340-201ENST00000517132 107 ntBASIC1.7□□□□□ -2.14
RPS28P62857 RN7SKP35-201ENST00000517210 151 ntBASIC1.7□□□□□ -2.14
RPS28P62857 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC1.7□□□□□ -2.14
RPS28P62857 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC1.7□□□□□ -2.14
RPS28P62857 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC1.7□□□□□ -2.14
RPS28P62857 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.7□□□□□ -2.14
RPS28P62857 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.7□□□□□ -2.14
RPS28P62857 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC1.7□□□□□ -2.14
RPS28P62857 YPEL5P3-201ENST00000547227 352 ntBASIC1.7□□□□□ -2.14
RPS28P62857 MT1CP-201ENST00000567054 174 ntBASIC1.7□□□□□ -2.14
RPS28P62857 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC1.7□□□□□ -2.14
RPS28P62857 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC1.7□□□□□ -2.14
RPS28P62857 AC009303.3-201ENST00000591103 736 ntBASIC1.7□□□□□ -2.14
RPS28P62857 AL031320.1-201ENST00000604177 357 ntBASIC1.7□□□□□ -2.14
RPS28P62857 AC120053.1-201ENST00000607706 736 ntBASIC1.7□□□□□ -2.14
RPS28P62857 AC097504.2-201ENST00000608088 454 ntBASIC1.7□□□□□ -2.14
RPS28P62857 AP001437.1-201ENST00000608783 456 ntBASIC1.7□□□□□ -2.14
RPS28P62857 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC1.7□□□□□ -2.14
RPS28P62857 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RPS28P62857 AL391597.1-201ENST00000618707 694 ntBASIC1.7□□□□□ -2.14
RPS28P62857 AC091932.3-201ENST00000624223 323 ntBASIC1.7□□□□□ -2.14
RPS28P62857 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RPS28P62857 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPS28P62857 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPS28P62857 AL645937.1-201ENST00000641739 1652 ntBASIC1.7□□□□□ -2.14
RPS28P62857 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPS28P62857 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPS28P62857 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RPS28P62857 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPS28P62857 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPS28P62857 OR5P1P-201ENST00000299512 925 ntBASIC1.69□□□□□ -2.14
RPS28P62857 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
RPS28P62857 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPS28P62857 U8.8-201ENST00000365399 135 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms