Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC233702.1-201ENST00000482905 502 ntBASIC2.64□□□□□ -1.99
LSM6P62312 AC087190.1-201ENST00000484462 480 ntBASIC2.64□□□□□ -1.99
LSM6P62312 AC093591.1-201ENST00000491435 481 ntBASIC2.64□□□□□ -1.99
LSM6P62312 RPL21P16-201ENST00000495531 483 ntBASIC2.64□□□□□ -1.99
LSM6P62312 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LSM6P62312 RN7SKP272-201ENST00000516988 232 ntBASIC2.64□□□□□ -1.99
LSM6P62312 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.64□□□□□ -1.99
LSM6P62312 PSMA2P1-201ENST00000526365 646 ntBASIC2.64□□□□□ -1.99
LSM6P62312 AC107016.2-201ENST00000547968 190 ntBASIC2.64□□□□□ -1.99
LSM6P62312 SETP2-201ENST00000553886 926 ntBASIC2.64□□□□□ -1.99
LSM6P62312 AL442163.2-201ENST00000553912 710 ntBASIC2.64□□□□□ -1.99
LSM6P62312 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.64□□□□□ -1.99
LSM6P62312 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.64□□□□□ -1.99
LSM6P62312 AC245036.5-201ENST00000596330 847 ntBASIC2.64□□□□□ -1.99
LSM6P62312 AL031985.2-201ENST00000600955 480 ntBASIC2.64□□□□□ -1.99
LSM6P62312 AL355812.1-201ENST00000603215 216 ntBASIC2.64□□□□□ -1.99
LSM6P62312 AC124312.4-201ENST00000605533 310 ntBASIC2.64□□□□□ -1.99
LSM6P62312 YPEL5P2-201ENST00000605553 359 ntBASIC2.64□□□□□ -1.99
LSM6P62312 MIR6076-201ENST00000617521 113 ntBASIC2.64□□□□□ -1.99
LSM6P62312 AC097372.4-201ENST00000625025 466 ntBASIC2.64□□□□□ -1.99
LSM6P62312 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LSM6P62312 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.64□□□□□ -1.99
LSM6P62312 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LSM6P62312 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
LSM6P62312 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LSM6P62312 RNA5SP139-201ENST00000364340 117 ntBASIC2.63□□□□□ -1.99
LSM6P62312 DSTNP4-201ENST00000399472 474 ntBASIC2.63□□□□□ -1.99
LSM6P62312 MTND4P13-201ENST00000402078 1023 ntBASIC2.63□□□□□ -1.99
LSM6P62312 RNA5SP56-201ENST00000410277 118 ntBASIC2.63□□□□□ -1.99
LSM6P62312 RNA5SP38-201ENST00000410750 119 ntBASIC2.63□□□□□ -1.99
LSM6P62312 AL606495.1-201ENST00000422100 813 ntBASIC2.63□□□□□ -1.99
LSM6P62312 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM6P62312 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM6P62312 Z96811.1-201ENST00000445880 108 ntBASIC2.63□□□□□ -1.99
LSM6P62312 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.63□□□□□ -1.99
LSM6P62312 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.63□□□□□ -1.99
LSM6P62312 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM6P62312 RPL21P131-201ENST00000497298 483 ntBASIC2.63□□□□□ -1.99
LSM6P62312 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LSM6P62312 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
LSM6P62312 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.63□□□□□ -1.99
LSM6P62312 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM6P62312 AC010306.1-201ENST00000523223 1117 ntBASIC2.63□□□□□ -1.99
LSM6P62312 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM6P62312 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.63□□□□□ -1.99
LSM6P62312 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM6P62312 CR383656.14-201ENST00000551951 406 ntBASIC2.63□□□□□ -1.99
LSM6P62312 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM6P62312 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LSM6P62312 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.63□□□□□ -1.99
LSM6P62312 AL669831.4-202ENST00000590817 238 ntBASIC2.63□□□□□ -1.99
LSM6P62312 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.63□□□□□ -1.99
LSM6P62312 RPL23AP78-201ENST00000599928 470 ntBASIC2.63□□□□□ -1.99
LSM6P62312 AC012119.1-201ENST00000603184 222 ntBASIC2.63□□□□□ -1.99
LSM6P62312 AC008083.4-201ENST00000615076 444 ntBASIC2.63□□□□□ -1.99
LSM6P62312 Z99129.2-201ENST00000619967 314 ntBASIC2.63□□□□□ -1.99
LSM6P62312 AC007318.2-201ENST00000620999 243 ntBASIC2.63□□□□□ -1.99
LSM6P62312 AC026422.1-201ENST00000623961 452 ntBASIC2.63□□□□□ -1.99
LSM6P62312 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
LSM6P62312 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.63□□□□□ -1.99
LSM6P62312 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.63□□□□□ -1.99
LSM6P62312 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.63□□□□□ -1.99
LSM6P62312 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
LSM6P62312 AC090740.1-201ENST00000623193 2262 ntBASIC2.62□□□□□ -1.99
LSM6P62312 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.62□□□□□ -1.99
LSM6P62312 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
LSM6P62312 RNU6-819P-201ENST00000364116 107 ntBASIC2.62□□□□□ -1.99
LSM6P62312 RNU6-374P-201ENST00000364146 108 ntBASIC2.62□□□□□ -1.99
LSM6P62312 SNORA71.1-201ENST00000364523 117 ntBASIC2.62□□□□□ -1.99
LSM6P62312 SNORA54-201ENST00000384281 123 ntBASIC2.62□□□□□ -1.99
LSM6P62312 GSTA8P-201ENST00000404253 637 ntBASIC2.62□□□□□ -1.99
LSM6P62312 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.62□□□□□ -1.99
LSM6P62312 AL356806.1-201ENST00000422524 916 ntBASIC2.62□□□□□ -1.99
LSM6P62312 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.62□□□□□ -1.99
LSM6P62312 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.62□□□□□ -1.99
LSM6P62312 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.62□□□□□ -1.99
LSM6P62312 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.62□□□□□ -1.99
LSM6P62312 AL592437.1-201ENST00000443781 492 ntBASIC2.62□□□□□ -1.99
LSM6P62312 AC092685.1-201ENST00000447960 1243 ntBASIC2.62□□□□□ -1.99
LSM6P62312 RPL23AP20-201ENST00000447965 421 ntBASIC2.62□□□□□ -1.99
LSM6P62312 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.62□□□□□ -1.99
LSM6P62312 RPL27AP5-201ENST00000469428 449 ntBASIC2.62□□□□□ -1.99
LSM6P62312 AC117440.1-201ENST00000474107 571 ntBASIC2.62□□□□□ -1.99
LSM6P62312 RN7SL504P-201ENST00000494496 287 ntBASIC2.62□□□□□ -1.99
LSM6P62312 OR2A20P-203ENST00000498397 1268 ntBASIC2.62□□□□□ -1.99
LSM6P62312 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LSM6P62312 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.62□□□□□ -1.99
LSM6P62312 IGKV2D-36-201ENST00000518643 226 ntBASIC2.62□□□□□ -1.99
LSM6P62312 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.62□□□□□ -1.99
LSM6P62312 HSPE1P20-201ENST00000538133 289 ntBASIC2.62□□□□□ -1.99
LSM6P62312 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.62□□□□□ -1.99
LSM6P62312 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.62□□□□□ -1.99
LSM6P62312 AL121603.1-201ENST00000553815 142 ntBASIC2.62□□□□□ -1.99
LSM6P62312 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.62□□□□□ -1.99
LSM6P62312 AC034105.3-201ENST00000565294 442 ntBASIC2.62□□□□□ -1.99
LSM6P62312 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.62□□□□□ -1.99
LSM6P62312 MIR1254-2-201ENST00000579553 63 ntBASIC2.62□□□□□ -1.99
LSM6P62312 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.62□□□□□ -1.99
LSM6P62312 SUMO2P14-201ENST00000604488 293 ntBASIC2.62□□□□□ -1.99
LSM6P62312 AC106791.2-201ENST00000604680 391 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms