Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
LSM3P62310 RNU6-1077P-201ENST00000410506 102 ntBASIC2.2□□□□□ -2.06
LSM3P62310 RFESDP1-201ENST00000422350 461 ntBASIC2.2□□□□□ -2.06
LSM3P62310 AL389915.1-201ENST00000422463 466 ntBASIC2.2□□□□□ -2.06
LSM3P62310 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
LSM3P62310 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.2□□□□□ -2.06
LSM3P62310 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM3P62310 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.2□□□□□ -2.06
LSM3P62310 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM3P62310 AC092593.2-201ENST00000513866 913 ntBASIC2.2□□□□□ -2.06
LSM3P62310 AC016065.2-201ENST00000514530 444 ntBASIC2.2□□□□□ -2.06
LSM3P62310 SNORA31.21-201ENST00000517180 77 ntBASIC2.2□□□□□ -2.06
LSM3P62310 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.2□□□□□ -2.06
LSM3P62310 OR4R2P-201ENST00000530815 597 ntBASIC2.2□□□□□ -2.06
LSM3P62310 AP003717.3-201ENST00000544832 1180 ntBASIC2.2□□□□□ -2.06
LSM3P62310 MIR3160-1-201ENST00000577972 85 ntBASIC2.2□□□□□ -2.06
LSM3P62310 MIR5004-201ENST00000579078 107 ntBASIC2.2□□□□□ -2.06
LSM3P62310 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM3P62310 AC008962.1-201ENST00000605729 304 ntBASIC2.2□□□□□ -2.06
LSM3P62310 AC012557.1-201ENST00000607115 611 ntBASIC2.2□□□□□ -2.06
LSM3P62310 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.2□□□□□ -2.06
LSM3P62310 ATP5A1P2-202ENST00000616464 443 ntBASIC2.2□□□□□ -2.06
LSM3P62310 AC091046.2-201ENST00000620775 665 ntBASIC2.2□□□□□ -2.06
LSM3P62310 MTCO1P8-201ENST00000416914 1523 ntBASIC2.2□□□□□ -2.06
LSM3P62310 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LSM3P62310 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
LSM3P62310 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.2□□□□□ -2.06
LSM3P62310 AC244517.1-201ENST00000606030 2086 ntBASIC2.19□□□□□ -2.06
LSM3P62310 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
LSM3P62310 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LSM3P62310 RNA5SP393-201ENST00000363423 117 ntBASIC2.19□□□□□ -2.06
LSM3P62310 RN7SKP227-201ENST00000364445 330 ntBASIC2.19□□□□□ -2.06
LSM3P62310 MIR554-201ENST00000384874 96 ntBASIC2.19□□□□□ -2.06
LSM3P62310 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
LSM3P62310 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LSM3P62310 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
LSM3P62310 FNDC3CP-201ENST00000420795 1155 ntBASIC2.19□□□□□ -2.06
LSM3P62310 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.19□□□□□ -2.06
LSM3P62310 UBE2D3P2-201ENST00000424409 445 ntBASIC2.19□□□□□ -2.06
LSM3P62310 AL031659.1-201ENST00000447075 539 ntBASIC2.19□□□□□ -2.06
LSM3P62310 AP002345.1-201ENST00000456493 928 ntBASIC2.19□□□□□ -2.06
LSM3P62310 RPL5P24-201ENST00000463742 885 ntBASIC2.19□□□□□ -2.06
LSM3P62310 AP000852.1-201ENST00000472460 573 ntBASIC2.19□□□□□ -2.06
LSM3P62310 MTCO3P35-201ENST00000485582 781 ntBASIC2.19□□□□□ -2.06
LSM3P62310 AL024509.2-201ENST00000493462 493 ntBASIC2.19□□□□□ -2.06
LSM3P62310 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.19□□□□□ -2.06
LSM3P62310 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.19□□□□□ -2.06
LSM3P62310 AC006499.5-201ENST00000505037 514 ntBASIC2.19□□□□□ -2.06
LSM3P62310 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.19□□□□□ -2.06
LSM3P62310 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.19□□□□□ -2.06
LSM3P62310 RPL7L1P13-201ENST00000511702 739 ntBASIC2.19□□□□□ -2.06
LSM3P62310 RNA5SP367-201ENST00000516557 118 ntBASIC2.19□□□□□ -2.06
LSM3P62310 RNA5SP82-201ENST00000516707 92 ntBASIC2.19□□□□□ -2.06
LSM3P62310 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.19□□□□□ -2.06
LSM3P62310 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.19□□□□□ -2.06
LSM3P62310 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.19□□□□□ -2.06
LSM3P62310 AL121594.4-201ENST00000556211 1196 ntBASIC2.19□□□□□ -2.06
LSM3P62310 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.19□□□□□ -2.06
LSM3P62310 AC136624.4-201ENST00000573044 370 ntBASIC2.19□□□□□ -2.06
LSM3P62310 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.19□□□□□ -2.06
LSM3P62310 AP001029.3-201ENST00000588063 596 ntBASIC2.19□□□□□ -2.06
LSM3P62310 AC006539.2-201ENST00000601729 572 ntBASIC2.19□□□□□ -2.06
LSM3P62310 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
LSM3P62310 AC073387.2-201ENST00000604797 784 ntBASIC2.19□□□□□ -2.06
LSM3P62310 AL590282.1-201ENST00000610379 1136 ntBASIC2.19□□□□□ -2.06
LSM3P62310 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.19□□□□□ -2.06
LSM3P62310 AL356863.1-201ENST00000623378 1080 ntBASIC2.19□□□□□ -2.06
LSM3P62310 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
LSM3P62310 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.19□□□□□ -2.06
LSM3P62310 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LSM3P62310 AL136520.1-201ENST00000600311 1322 ntBASIC2.18□□□□□ -2.06
LSM3P62310 AC026951.1-201ENST00000559530 2459 ntBASIC2.18□□□□□ -2.06
LSM3P62310 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LSM3P62310 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.18□□□□□ -2.06
LSM3P62310 AC087565.3-202ENST00000642085 1603 ntBASIC2.18□□□□□ -2.06
LSM3P62310 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LSM3P62310 SNORD62.1-201ENST00000362541 86 ntBASIC2.18□□□□□ -2.06
LSM3P62310 RNU6-185P-201ENST00000384421 107 ntBASIC2.18□□□□□ -2.06
LSM3P62310 RNA5SP21-201ENST00000410917 96 ntBASIC2.18□□□□□ -2.06
LSM3P62310 AL158825.1-201ENST00000414735 521 ntBASIC2.18□□□□□ -2.06
LSM3P62310 AC073508.1-201ENST00000428866 656 ntBASIC2.18□□□□□ -2.06
LSM3P62310 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM3P62310 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC2.18□□□□□ -2.06
LSM3P62310 ATP5F1P1-201ENST00000433775 569 ntBASIC2.18□□□□□ -2.06
LSM3P62310 RPS7P2-201ENST00000435134 607 ntBASIC2.18□□□□□ -2.06
LSM3P62310 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM3P62310 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM3P62310 RPL31P20-201ENST00000449593 360 ntBASIC2.18□□□□□ -2.06
LSM3P62310 HMGB1P26-201ENST00000452520 628 ntBASIC2.18□□□□□ -2.06
LSM3P62310 AC234775.1-201ENST00000454247 670 ntBASIC2.18□□□□□ -2.06
LSM3P62310 AC010285.1-201ENST00000470580 392 ntBASIC2.18□□□□□ -2.06
LSM3P62310 AC010301.1-201ENST00000473936 355 ntBASIC2.18□□□□□ -2.06
LSM3P62310 HMGB1P3-201ENST00000502802 616 ntBASIC2.18□□□□□ -2.06
LSM3P62310 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.18□□□□□ -2.06
LSM3P62310 ACTR6P1-201ENST00000514311 1104 ntBASIC2.18□□□□□ -2.06
LSM3P62310 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.18□□□□□ -2.06
LSM3P62310 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.18□□□□□ -2.06
LSM3P62310 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.18□□□□□ -2.06
LSM3P62310 AL110115.1-201ENST00000614396 364 ntBASIC2.18□□□□□ -2.06
LSM3P62310 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms