Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D3P61077 ZNF807-201ENST00000328088 1707 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 RNU1-100P-201ENST00000365255 165 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D3P61077 DEFB109C-201ENST00000382575 264 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 DEFB109B-201ENST00000382656 264 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 SNORA18.3-201ENST00000384122 132 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D3P61077 U3.37-201ENST00000408528 213 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D3P61077 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.87□□□□□ -2.11
UBE2D3P61077 AC087499.2-201ENST00000432861 149 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
UBE2D3P61077 ELOCP11-201ENST00000436690 332 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 RPS12P2-201ENST00000439728 269 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 ELOCP16-201ENST00000444494 332 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 MTCO3P35-201ENST00000485582 781 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.87□□□□□ -2.11
UBE2D3P61077 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE2D3P61077 HIGD1AP13-201ENST00000509878 289 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.87□□□□□ -2.11
UBE2D3P61077 RNA5SP82-201ENST00000516707 92 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 RNU6-1073P-201ENST00000517182 106 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D3P61077 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.87□□□□□ -2.11
UBE2D3P61077 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D3P61077 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.87□□□□□ -2.11
UBE2D3P61077 DNAJC8P1-201ENST00000554535 372 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 ACTR3BP3-201ENST00000565577 979 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 MYL12BP1-201ENST00000569826 507 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.87□□□□□ -2.11
UBE2D3P61077 AP001029.3-201ENST00000588063 596 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 AC007179.3-201ENST00000604976 235 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 AC113194.1-201ENST00000606037 500 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 AC096577.2-201ENST00000611455 153 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 AL392048.1-201ENST00000613946 534 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 AC140725.3-201ENST00000616193 880 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 AP003122.6-201ENST00000623831 495 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 AC004777.1-201ENST00000624317 287 ntBASIC1.87□□□□□ -2.11
UBE2D3P61077 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D3P61077 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.87□□□□□ -2.11
UBE2D3P61077 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D3P61077 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D3P61077 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
UBE2D3P61077 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
UBE2D3P61077 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.86□□□□□ -2.11
UBE2D3P61077 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
UBE2D3P61077 RNU6-1027P-201ENST00000383998 107 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 MIR144-201ENST00000384886 86 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 AL591034.1-201ENST00000407447 340 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 USP9YP27-201ENST00000418455 438 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 KRR1P1-201ENST00000419430 803 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 AL606490.8-201ENST00000441624 319 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.86□□□□□ -2.11
UBE2D3P61077 NANOGNBP1-201ENST00000448444 480 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 AL445669.2-201ENST00000454425 421 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC1.86□□□□□ -2.11
UBE2D3P61077 AC126182.1-201ENST00000478134 357 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 HMGB1P38-201ENST00000490557 577 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 AC023424.2-201ENST00000493479 777 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.86□□□□□ -2.11
UBE2D3P61077 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.86□□□□□ -2.11
UBE2D3P61077 AC100870.1-201ENST00000522035 505 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.86□□□□□ -2.11
UBE2D3P61077 AC007336.1-201ENST00000576365 3828 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 AC022884.3-201ENST00000579571 248 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.86□□□□□ -2.11
UBE2D3P61077 AC084373.1-201ENST00000603311 235 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 AC019159.1-201ENST00000605094 187 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.86□□□□□ -2.11
UBE2D3P61077 AC010809.3-201ENST00000621310 641 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.86□□□□□ -2.11
UBE2D3P61077 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.86□□□□□ -2.11
UBE2D3P61077 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
UBE2D3P61077 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
UBE2D3P61077 AC073346.2-201ENST00000624724 2058 ntBASIC1.86□□□□□ -2.11
UBE2D3P61077 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
UBE2D3P61077 AC012321.1-201ENST00000561622 1588 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.85□□□□□ -2.11
UBE2D3P61077 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.85□□□□□ -2.11
UBE2D3P61077 SNORA14A-201ENST00000364773 135 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.85□□□□□ -2.11
UBE2D3P61077 SNORA44-201ENST00000384584 132 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 RNA5SP210-201ENST00000391034 120 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 RPS4XP7-201ENST00000406274 780 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 AF274854.1-201ENST00000413236 615 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 YPEL5P1-201ENST00000419731 367 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 AC073508.1-201ENST00000428866 656 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 AL135938.1-201ENST00000443141 297 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 HSFY3P-201ENST00000444242 1191 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
UBE2D3P61077 RPS29P12-201ENST00000460178 152 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.85□□□□□ -2.11
UBE2D3P61077 AC090543.1-201ENST00000492168 485 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 AC009901.1-201ENST00000506703 541 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.85□□□□□ -2.11
UBE2D3P61077 AC010625.1-201ENST00000511296 403 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 RPL7L1P13-201ENST00000511702 739 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 SNORA31.21-201ENST00000517180 77 ntBASIC1.85□□□□□ -2.11
UBE2D3P61077 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms