Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC110794.1-201ENST00000505816 425 ntBASIC2.62□□□□□ -1.99
GTF2A1P52655 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.62□□□□□ -1.99
GTF2A1P52655 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.62□□□□□ -1.99
GTF2A1P52655 AC025768.1-201ENST00000510057 267 ntBASIC2.62□□□□□ -1.99
GTF2A1P52655 AC105914.1-201ENST00000511798 226 ntBASIC2.62□□□□□ -1.99
GTF2A1P52655 MTCO1P47-201ENST00000523889 1271 ntBASIC2.62□□□□□ -1.99
GTF2A1P52655 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.62□□□□□ -1.99
GTF2A1P52655 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.62□□□□□ -1.99
GTF2A1P52655 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.62□□□□□ -1.99
GTF2A1P52655 HIGD1AP5-201ENST00000529959 259 ntBASIC2.62□□□□□ -1.99
GTF2A1P52655 AC123904.3-201ENST00000547218 814 ntBASIC2.62□□□□□ -1.99
GTF2A1P52655 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.62□□□□□ -1.99
GTF2A1P52655 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.62□□□□□ -1.99
GTF2A1P52655 AC106785.1-201ENST00000565935 262 ntBASIC2.62□□□□□ -1.99
GTF2A1P52655 MTND4LP24-201ENST00000572277 291 ntBASIC2.62□□□□□ -1.99
GTF2A1P52655 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.62□□□□□ -1.99
GTF2A1P52655 MTCO2P22-201ENST00000603246 681 ntBASIC2.62□□□□□ -1.99
GTF2A1P52655 NF1P10-201ENST00000613227 742 ntBASIC2.62□□□□□ -1.99
GTF2A1P52655 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.62□□□□□ -1.99
GTF2A1P52655 AC139713.2-210ENST00000641741 992 ntBASIC2.62□□□□□ -1.99
GTF2A1P52655 ZNF720P1-201ENST00000562403 1939 ntBASIC2.62□□□□□ -1.99
GTF2A1P52655 ZNF519P1-201ENST00000449011 1626 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
GTF2A1P52655 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
GTF2A1P52655 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
GTF2A1P52655 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
GTF2A1P52655 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
GTF2A1P52655 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.61□□□□□ -1.99
GTF2A1P52655 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
GTF2A1P52655 RNU4-52P-201ENST00000384209 138 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 SNORD65-201ENST00000391079 73 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC2.61□□□□□ -1.99
GTF2A1P52655 MIR1193-201ENST00000408109 78 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 HMGN2P38-201ENST00000423806 265 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 RPS24P8-201ENST00000431490 402 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
GTF2A1P52655 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
GTF2A1P52655 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.61□□□□□ -1.99
GTF2A1P52655 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.61□□□□□ -1.99
GTF2A1P52655 RPS23P3-201ENST00000470993 430 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 GTF2IP9-201ENST00000502460 301 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.61□□□□□ -1.99
GTF2A1P52655 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.61□□□□□ -1.99
GTF2A1P52655 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.61□□□□□ -1.99
GTF2A1P52655 AC005351.1-201ENST00000511152 786 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.61□□□□□ -1.99
GTF2A1P52655 CIR1P1-201ENST00000524055 1133 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.61□□□□□ -1.99
GTF2A1P52655 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.61□□□□□ -1.99
GTF2A1P52655 NCAPGP2-201ENST00000557911 754 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 SNORD53-201ENST00000579969 78 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 AC005242.1-201ENST00000585658 438 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 AC119501.1-201ENST00000603646 475 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
GTF2A1P52655 RPL23AP61-201ENST00000623642 466 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.61□□□□□ -1.99
GTF2A1P52655 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.61□□□□□ -1.99
GTF2A1P52655 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
GTF2A1P52655 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.61□□□□□ -1.99
GTF2A1P52655 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.61□□□□□ -1.99
GTF2A1P52655 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
GTF2A1P52655 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
GTF2A1P52655 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
GTF2A1P52655 AL355596.1-201ENST00000565399 3996 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 AL035425.3-201ENST00000564206 4996 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 AL596028.1-201ENST00000326971 197 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.6□□□□□ -1.99
GTF2A1P52655 MIR22-201ENST00000362190 85 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 AC234772.1-201ENST00000377927 937 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 Y_RNA.625-201ENST00000411256 107 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 RNA5SP498-201ENST00000411342 120 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
GTF2A1P52655 AC091390.1-201ENST00000433904 331 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 Z95327.1-201ENST00000446082 482 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 AC109925.1-201ENST00000478069 331 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 AC090255.1-201ENST00000495779 349 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 PRELID3BP6-201ENST00000503839 571 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
GTF2A1P52655 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.6□□□□□ -1.99
GTF2A1P52655 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
GTF2A1P52655 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.6□□□□□ -1.99
GTF2A1P52655 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.6□□□□□ -1.99
GTF2A1P52655 AC010285.3-201ENST00000511668 676 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.6□□□□□ -1.99
GTF2A1P52655 AP000889.2-201ENST00000532684 490 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
GTF2A1P52655 AP003717.3-201ENST00000544832 1180 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
GTF2A1P52655 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.6□□□□□ -1.99
GTF2A1P52655 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
GTF2A1P52655 MIR622-201ENST00000638396 96 ntBASIC2.6□□□□□ -1.99
GTF2A1P52655 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.6□□□□□ -1.99
GTF2A1P52655 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
GTF2A1P52655 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.59□□□□□ -1.99
GTF2A1P52655 AL513331.1-201ENST00000411908 397 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 FNDC3CP-201ENST00000420795 1155 ntBASIC2.59□□□□□ -1.99
GTF2A1P52655 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.59□□□□□ -1.99
GTF2A1P52655 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms