Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AL360157.1-201ENST00000565962 87 ntBASIC5.2□□□□□ -1.58
MRE11P49959 RN7SL690P-201ENST00000582087 240 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.2□□□□□ -1.58
MRE11P49959 AC012603.1-201ENST00000606424 528 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AC090948.2-201ENST00000607363 564 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AC091965.4-201ENST00000607691 587 ntBASIC5.2□□□□□ -1.58
MRE11P49959 AC131902.3-201ENST00000611767 581 ntBASIC5.2□□□□□ -1.58
MRE11P49959 FAM157B-203ENST00000639350 358 ntBASIC5.2□□□□□ -1.58
MRE11P49959 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.2□□□□□ -1.58
MRE11P49959 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MRE11P49959 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MRE11P49959 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
MRE11P49959 RNU6-462P-201ENST00000362659 105 ntBASIC5.19□□□□□ -1.58
MRE11P49959 RNU6-1122P-201ENST00000384449 107 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AL450338.1-201ENST00000407987 512 ntBASIC5.19□□□□□ -1.58
MRE11P49959 MIR1277-201ENST00000408536 78 ntBASIC5.19□□□□□ -1.58
MRE11P49959 RN7SKP177-201ENST00000410567 355 ntBASIC5.19□□□□□ -1.58
MRE11P49959 FCF1P2-201ENST00000415284 583 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AC016831.2-201ENST00000417179 352 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AF186996.5-201ENST00000418098 904 ntBASIC5.19□□□□□ -1.58
MRE11P49959 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.19□□□□□ -1.58
MRE11P49959 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.19□□□□□ -1.58
MRE11P49959 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.19□□□□□ -1.58
MRE11P49959 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.19□□□□□ -1.58
MRE11P49959 ARL2BPP10-201ENST00000446487 531 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.19□□□□□ -1.58
MRE11P49959 MTND5P20-201ENST00000448677 143 ntBASIC5.19□□□□□ -1.58
MRE11P49959 PRSS3P4-201ENST00000453323 162 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AL033528.1-201ENST00000453780 140 ntBASIC5.19□□□□□ -1.58
MRE11P49959 RPL23AP71-201ENST00000470966 469 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AC041039.1-201ENST00000485656 536 ntBASIC5.19□□□□□ -1.58
MRE11P49959 GAPDHP56-201ENST00000506031 988 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.19□□□□□ -1.58
MRE11P49959 AC117522.1-201ENST00000509821 380 ntBASIC5.19□□□□□ -1.58
MRE11P49959 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.19□□□□□ -1.58
MRE11P49959 HIGD1AP6-201ENST00000521833 279 ntBASIC5.19□□□□□ -1.58
MRE11P49959 DEFB131D-201ENST00000526803 184 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AP001646.1-201ENST00000527936 915 ntBASIC5.19□□□□□ -1.58
MRE11P49959 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.19□□□□□ -1.58
MRE11P49959 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.19□□□□□ -1.58
MRE11P49959 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.19□□□□□ -1.58
MRE11P49959 AC068446.3-201ENST00000555285 382 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.19□□□□□ -1.58
MRE11P49959 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.19□□□□□ -1.58
MRE11P49959 CYCSP2-201ENST00000558168 301 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AC093519.1-201ENST00000566109 298 ntBASIC5.19□□□□□ -1.58
MRE11P49959 MIR3913-1-201ENST00000577744 102 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.19□□□□□ -1.58
MRE11P49959 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.19□□□□□ -1.58
MRE11P49959 VN1R79P-201ENST00000593540 513 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AC010200.2-201ENST00000605098 235 ntBASIC5.19□□□□□ -1.58
MRE11P49959 HMGB1P50-201ENST00000605814 607 ntBASIC5.19□□□□□ -1.58
MRE11P49959 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.19□□□□□ -1.58
MRE11P49959 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.19□□□□□ -1.58
MRE11P49959 AC026634.1-201ENST00000634369 198 ntBASIC5.19□□□□□ -1.58
MRE11P49959 MIR3688-2-201ENST00000636963 87 ntBASIC5.19□□□□□ -1.58
MRE11P49959 CRYM-AS1-204ENST00000637983 556 ntBASIC5.19□□□□□ -1.58
MRE11P49959 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
MRE11P49959 AC119744.1-201ENST00000454746 1715 ntBASIC5.19□□□□□ -1.58
MRE11P49959 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.19□□□□□ -1.58
MRE11P49959 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.18□□□□□ -1.58
MRE11P49959 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MRE11P49959 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MRE11P49959 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MRE11P49959 ZNF962P-201ENST00000443465 3140 ntBASIC5.18□□□□□ -1.58
MRE11P49959 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
MRE11P49959 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
MRE11P49959 Y_RNA.97-201ENST00000363094 102 ntBASIC5.18□□□□□ -1.58
MRE11P49959 RN7SKP280-201ENST00000364196 304 ntBASIC5.18□□□□□ -1.58
MRE11P49959 SNORA70C-201ENST00000384538 135 ntBASIC5.18□□□□□ -1.58
MRE11P49959 MIR554-201ENST00000384874 96 ntBASIC5.18□□□□□ -1.58
MRE11P49959 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.18□□□□□ -1.58
MRE11P49959 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.18□□□□□ -1.58
MRE11P49959 MTCO3P1-205ENST00000422088 832 ntBASIC5.18□□□□□ -1.58
MRE11P49959 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.18□□□□□ -1.58
MRE11P49959 MTCO3P18-201ENST00000440206 761 ntBASIC5.18□□□□□ -1.58
MRE11P49959 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
MRE11P49959 OR1H1P-201ENST00000448731 937 ntBASIC5.18□□□□□ -1.58
MRE11P49959 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.18□□□□□ -1.58
MRE11P49959 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.18□□□□□ -1.58
MRE11P49959 NF1P3-201ENST00000457709 450 ntBASIC5.18□□□□□ -1.58
MRE11P49959 AC090142.1-201ENST00000465776 462 ntBASIC5.18□□□□□ -1.58
MRE11P49959 AC092989.1-201ENST00000481235 277 ntBASIC5.18□□□□□ -1.58
MRE11P49959 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.18□□□□□ -1.58
MRE11P49959 MTCYBP17-201ENST00000503579 789 ntBASIC5.18□□□□□ -1.58
MRE11P49959 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.18□□□□□ -1.58
MRE11P49959 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.18□□□□□ -1.58
MRE11P49959 ARL2BPP6-201ENST00000512757 439 ntBASIC5.18□□□□□ -1.58
MRE11P49959 AC026726.1-201ENST00000512859 601 ntBASIC5.18□□□□□ -1.58
MRE11P49959 Y_RNA.702-201ENST00000516843 96 ntBASIC5.18□□□□□ -1.58
MRE11P49959 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
MRE11P49959 IGLVIV-53-201ENST00000520107 367 ntBASIC5.18□□□□□ -1.58
MRE11P49959 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.18□□□□□ -1.58
MRE11P49959 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.18□□□□□ -1.58
MRE11P49959 EIF5A2P1-201ENST00000564027 460 ntBASIC5.18□□□□□ -1.58
MRE11P49959 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.18□□□□□ -1.58
MRE11P49959 MIR5699-201ENST00000578903 90 ntBASIC5.18□□□□□ -1.58
MRE11P49959 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.18□□□□□ -1.58
MRE11P49959 VN1R84P-201ENST00000593697 235 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms