Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SCN4AP35499 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN4AP35499 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN4AP35499 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN4AP35499 MTND3P4-201ENST00000453537 303 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 AC008280.2-201ENST00000455473 307 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SCN4AP35499 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN4AP35499 RPL23AP44-201ENST00000482216 473 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 RN7SL636P-201ENST00000497504 294 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 MTND5P21-201ENST00000531961 522 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN4AP35499 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.14□□□□□ -1.91
SCN4AP35499 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN4AP35499 AC092593.1-201ENST00000515413 1815 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 XPOTP1-201ENST00000443317 2398 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SCN4AP35499 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.14□□□□□ -1.91
SCN4AP35499 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SCN4AP35499 AC091564.4-201ENST00000533934 2194 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SCN4AP35499 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCN4AP35499 SNORD114-1-201ENST00000362705 72 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCN4AP35499 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN4AP35499 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.14□□□□□ -1.91
SCN4AP35499 AC022022.1-201ENST00000430304 178 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 AC112220.1-201ENST00000434628 355 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.14□□□□□ -1.91
SCN4AP35499 AL049830.2-201ENST00000480072 201 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.14□□□□□ -1.91
SCN4AP35499 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.14□□□□□ -1.91
SCN4AP35499 MIR1273D-201ENST00000577266 86 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 AC092159.4-201ENST00000624944 550 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 AC099063.3-201ENST00000642066 185 ntBASIC3.14□□□□□ -1.91
SCN4AP35499 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.13□□□□□ -1.91
SCN4AP35499 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
SCN4AP35499 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SCN4AP35499 AC107081.3-201ENST00000612715 2034 ntBASIC3.13□□□□□ -1.91
SCN4AP35499 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.13□□□□□ -1.91
SCN4AP35499 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SCN4AP35499 RN7SKP123-201ENST00000410732 291 ntBASIC3.13□□□□□ -1.91
SCN4AP35499 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.13□□□□□ -1.91
SCN4AP35499 MTCO1P39-201ENST00000426148 480 ntBASIC3.13□□□□□ -1.91
SCN4AP35499 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SCN4AP35499 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.13□□□□□ -1.91
SCN4AP35499 GAPDHP27-201ENST00000447427 1020 ntBASIC3.13□□□□□ -1.91
SCN4AP35499 GAPDHP39-201ENST00000481866 979 ntBASIC3.13□□□□□ -1.91
SCN4AP35499 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SCN4AP35499 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.13□□□□□ -1.91
SCN4AP35499 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
SCN4AP35499 OR4V1P-201ENST00000525394 1140 ntBASIC3.13□□□□□ -1.91
SCN4AP35499 OR5D17P-201ENST00000531492 978 ntBASIC3.13□□□□□ -1.91
SCN4AP35499 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.13□□□□□ -1.91
SCN4AP35499 AC044913.1-201ENST00000557200 430 ntBASIC3.13□□□□□ -1.91
SCN4AP35499 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.13□□□□□ -1.91
SCN4AP35499 AC069234.5-201ENST00000611056 416 ntBASIC3.13□□□□□ -1.91
SCN4AP35499 AC026634.1-201ENST00000634369 198 ntBASIC3.13□□□□□ -1.91
SCN4AP35499 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
SCN4AP35499 RPL21P132-201ENST00000331267 462 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 MIR27B-201ENST00000385129 97 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 RPLP0P7-201ENST00000416050 667 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN4AP35499 YPEL5P1-201ENST00000419731 367 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN4AP35499 RPL23AP31-201ENST00000456160 467 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 RNU6-362P-201ENST00000516736 90 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AC067904.2-201ENST00000517322 1283 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN4AP35499 AC074029.2-201ENST00000551045 634 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 ZNF861P-201ENST00000588126 639 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.12□□□□□ -1.91
SCN4AP35499 AC084373.1-201ENST00000603311 235 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AC068313.1-201ENST00000604028 1008 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AC107294.3-201ENST00000609211 526 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 LINC00216-201ENST00000623548 1126 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AC009039.2-201ENST00000624524 529 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 U6.98-201ENST00000637157 84 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN4AP35499 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SCN4AP35499 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SCN4AP35499 AC110792.3-201ENST00000595906 1614 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SCN4AP35499 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SCN4AP35499 MIR518C-201ENST00000384822 101 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 GSTA12P-201ENST00000402398 508 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN4AP35499 RPS12P2-201ENST00000439728 269 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AL035551.1-201ENST00000446931 348 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AC011037.1-201ENST00000483964 558 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AC108860.1-201ENST00000484521 383 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AC108157.1-201ENST00000510511 539 ntBASIC3.12□□□□□ -1.91
SCN4AP35499 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.12□□□□□ -1.91
SCN4AP35499 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SCN4AP35499 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SCN4AP35499 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.11□□□□□ -1.91
SCN4AP35499 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SCN4AP35499 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms