Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RNU6-1226P-201ENST00000384317 107 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 RNU6-441P-201ENST00000384545 106 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 AL583834.1-201ENST00000406943 343 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 UBE2V1P9-201ENST00000414760 368 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHMT2P34897 AC006028.1-201ENST00000438379 402 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 ARF4P4-201ENST00000439608 520 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 AC104978.1-201ENST00000449387 391 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.18□□□□□ -1.9
SHMT2P34897 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHMT2P34897 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHMT2P34897 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.18□□□□□ -1.9
SHMT2P34897 AC011352.3-201ENST00000505162 593 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHMT2P34897 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.18□□□□□ -1.9
SHMT2P34897 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SHMT2P34897 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHMT2P34897 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SHMT2P34897 OR8K4P-201ENST00000534608 872 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.18□□□□□ -1.9
SHMT2P34897 CYB5AP5-201ENST00000549779 389 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 AC104072.1-201ENST00000568817 668 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 AC090666.1-201ENST00000578241 445 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.18□□□□□ -1.9
SHMT2P34897 AC126365.2-201ENST00000580630 379 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 AC008507.2-201ENST00000588402 1176 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 AC007566.2-201ENST00000603642 413 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 AL354976.1-201ENST00000613843 387 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.18□□□□□ -1.9
SHMT2P34897 AC092184.1-201ENST00000625042 715 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.18□□□□□ -1.9
SHMT2P34897 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHMT2P34897 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
SHMT2P34897 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SHMT2P34897 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHMT2P34897 AC002546.1-201ENST00000588041 2504 ntBASIC3.18□□□□□ -1.9
SHMT2P34897 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHMT2P34897 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHMT2P34897 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHMT2P34897 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.17□□□□□ -1.9
SHMT2P34897 MTND5P27-201ENST00000428871 1720 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHMT2P34897 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHMT2P34897 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SHMT2P34897 AL139098.1-201ENST00000407291 389 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 AC069282.1-201ENST00000411911 526 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.17□□□□□ -1.9
SHMT2P34897 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.17□□□□□ -1.9
SHMT2P34897 AC114973.1-201ENST00000429057 632 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 MTCYBP15-201ENST00000433123 1127 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.17□□□□□ -1.9
SHMT2P34897 HMGB3P11-201ENST00000440127 604 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 AL592437.1-201ENST00000443781 492 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 BTF3P5-201ENST00000457252 467 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 CAB39P1-201ENST00000502277 460 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 RNF138P1-201ENST00000502765 546 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 AC109471.1-201ENST00000511631 612 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 AC104057.1-201ENST00000515547 497 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.17□□□□□ -1.9
SHMT2P34897 AP001207.1-201ENST00000524051 481 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SHMT2P34897 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.17□□□□□ -1.9
SHMT2P34897 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SHMT2P34897 AC087894.1-201ENST00000538359 518 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.17□□□□□ -1.9
SHMT2P34897 MIR4666A-201ENST00000580160 79 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 OR4G1P-201ENST00000588632 938 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 RPAP2P1-201ENST00000603626 1168 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.17□□□□□ -1.9
SHMT2P34897 AC096577.2-201ENST00000611455 153 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 AC009464.1-201ENST00000615731 469 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.17□□□□□ -1.9
SHMT2P34897 AC080188.3-201ENST00000624842 748 ntBASIC3.17□□□□□ -1.9
SHMT2P34897 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.17□□□□□ -1.9
SHMT2P34897 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SHMT2P34897 AC111188.2-201ENST00000529697 1387 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SHMT2P34897 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SHMT2P34897 MIR208A-201ENST00000362287 71 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 RNU1-70P-201ENST00000362618 164 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 AL603865.2-201ENST00000401679 213 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 SSXP10-201ENST00000402595 565 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 AL357075.1-201ENST00000404107 726 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 GSTA8P-201ENST00000404253 637 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 AC006960.1-201ENST00000419980 153 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 B3GNT2P1-201ENST00000434960 952 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 CST9LP2-201ENST00000437612 320 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.16□□□□□ -1.9
SHMT2P34897 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.16□□□□□ -1.9
SHMT2P34897 Z99127.3-201ENST00000448158 395 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.16□□□□□ -1.9
SHMT2P34897 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.16□□□□□ -1.9
SHMT2P34897 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.16□□□□□ -1.9
SHMT2P34897 snoU13.22-201ENST00000459428 104 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.16□□□□□ -1.9
SHMT2P34897 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.16□□□□□ -1.9
SHMT2P34897 AC048346.1-201ENST00000510247 144 ntBASIC3.16□□□□□ -1.9
SHMT2P34897 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.16□□□□□ -1.9
SHMT2P34897 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.16□□□□□ -1.9
SHMT2P34897 AC245166.1-201ENST00000521012 253 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms