Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 BMS1P21-201ENST00000634565 365 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 AL392088.2-201ENST00000637607 285 ntBASIC5.14□□□□□ -1.59
CNGA1P29973 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CNGA1P29973 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.14□□□□□ -1.59
CNGA1P29973 AC027287.1-201ENST00000553115 1453 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CNGA1P29973 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CNGA1P29973 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CNGA1P29973 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNGA1P29973 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNGA1P29973 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNGA1P29973 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNGA1P29973 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNGA1P29973 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
CNGA1P29973 AC139713.2-215ENST00000641428 5037 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNGA1P29973 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.13□□□□□ -1.59
CNGA1P29973 RNU6-1207P-201ENST00000384343 107 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 SNORD115.1-201ENST00000391109 76 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 RNA5SP317-201ENST00000410176 116 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 Y_RNA.608-201ENST00000410647 95 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 RNA5SP311-201ENST00000411290 116 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.13□□□□□ -1.59
CNGA1P29973 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.13□□□□□ -1.59
CNGA1P29973 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.13□□□□□ -1.59
CNGA1P29973 AL132765.1-201ENST00000434165 553 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 ATP5C1P1-201ENST00000441945 895 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 AL022238.1-201ENST00000442557 355 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNGA1P29973 PDSS1P2-201ENST00000449397 678 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.13□□□□□ -1.59
CNGA1P29973 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.13□□□□□ -1.59
CNGA1P29973 TPT1P7-201ENST00000458300 517 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.13□□□□□ -1.59
CNGA1P29973 RNA5SP315-201ENST00000516340 116 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 RNA5SP312-201ENST00000517068 116 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.13□□□□□ -1.59
CNGA1P29973 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.13□□□□□ -1.59
CNGA1P29973 AP002453.2-201ENST00000533503 320 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CNGA1P29973 PDCD5P1-201ENST00000543528 309 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.13□□□□□ -1.59
CNGA1P29973 AC005951.1-201ENST00000576706 485 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 SEPT7P9-203ENST00000604116 343 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 AC245389.1-201ENST00000605141 529 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 AC020634.1-201ENST00000608701 549 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 AC013562.2-201ENST00000611632 603 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 SNX18P1Y-201ENST00000616231 511 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 AC084035.1-201ENST00000634543 607 ntBASIC5.13□□□□□ -1.59
CNGA1P29973 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CNGA1P29973 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CNGA1P29973 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.13□□□□□ -1.59
CNGA1P29973 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.13□□□□□ -1.59
CNGA1P29973 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.13□□□□□ -1.59
CNGA1P29973 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.13□□□□□ -1.59
CNGA1P29973 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.12□□□□□ -1.59
CNGA1P29973 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.12□□□□□ -1.59
CNGA1P29973 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNGA1P29973 AL391684.1-202ENST00000641293 1636 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.12□□□□□ -1.59
CNGA1P29973 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CNGA1P29973 MTND5P3-201ENST00000438536 1800 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNGA1P29973 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.12□□□□□ -1.59
CNGA1P29973 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CNGA1P29973 MIR383-201ENST00000362257 73 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 RNU6-297P-201ENST00000384636 107 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.12□□□□□ -1.59
CNGA1P29973 AL592291.1-201ENST00000403830 352 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.12□□□□□ -1.59
CNGA1P29973 USP9YP14-201ENST00000430663 563 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.12□□□□□ -1.59
CNGA1P29973 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.12□□□□□ -1.59
CNGA1P29973 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.12□□□□□ -1.59
CNGA1P29973 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.12□□□□□ -1.59
CNGA1P29973 TDGF1P1-201ENST00000445734 527 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.12□□□□□ -1.59
CNGA1P29973 AC053481.1-201ENST00000467217 306 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.12□□□□□ -1.59
CNGA1P29973 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNGA1P29973 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.12□□□□□ -1.59
CNGA1P29973 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.12□□□□□ -1.59
CNGA1P29973 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5.12□□□□□ -1.59
CNGA1P29973 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.12□□□□□ -1.59
CNGA1P29973 AP003033.1-201ENST00000527244 415 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 OR4P1P-201ENST00000530808 1136 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 SETP7-201ENST00000552169 453 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.12□□□□□ -1.59
CNGA1P29973 ZNF519P3-201ENST00000557158 1032 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.12□□□□□ -1.59
CNGA1P29973 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.12□□□□□ -1.59
CNGA1P29973 AC009101.1-201ENST00000568135 242 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.12□□□□□ -1.59
CNGA1P29973 BNIP3P8-201ENST00000597863 560 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 AC015871.2-201ENST00000603605 948 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 AL136363.2-201ENST00000604173 851 ntBASIC5.12□□□□□ -1.59
CNGA1P29973 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CNGA1P29973 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms