Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.4□□□□□ -1.87
PTPN6P29350 BNIP3P27-201ENST00000599991 412 ntBASIC3.4□□□□□ -1.87
PTPN6P29350 AC096947.1-201ENST00000603233 470 ntBASIC3.4□□□□□ -1.87
PTPN6P29350 AC006077.1-201ENST00000604746 343 ntBASIC3.4□□□□□ -1.87
PTPN6P29350 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.4□□□□□ -1.87
PTPN6P29350 AF129408.1-201ENST00000608767 431 ntBASIC3.4□□□□□ -1.87
PTPN6P29350 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.4□□□□□ -1.87
PTPN6P29350 AC008083.4-201ENST00000615076 444 ntBASIC3.4□□□□□ -1.87
PTPN6P29350 AC004808.1-201ENST00000627671 721 ntBASIC3.4□□□□□ -1.87
PTPN6P29350 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PTPN6P29350 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PTPN6P29350 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.4□□□□□ -1.87
PTPN6P29350 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PTPN6P29350 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PTPN6P29350 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTPN6P29350 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PTPN6P29350 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTPN6P29350 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PTPN6P29350 ZNF285B-201ENST00000561698 1767 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PTPN6P29350 AP002088.1-201ENST00000382740 395 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 SNORD3H-201ENST00000384486 214 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 MIR449B-201ENST00000384995 97 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 RPL21P17-201ENST00000397467 475 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.39□□□□□ -1.87
PTPN6P29350 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.39□□□□□ -1.87
PTPN6P29350 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.39□□□□□ -1.87
PTPN6P29350 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.39□□□□□ -1.87
PTPN6P29350 AL158071.1-201ENST00000430315 461 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.39□□□□□ -1.87
PTPN6P29350 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.39□□□□□ -1.87
PTPN6P29350 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.39□□□□□ -1.87
PTPN6P29350 AC079776.3-201ENST00000450665 370 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 SSXP4-201ENST00000451349 245 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 MTND2P39-201ENST00000457230 764 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 RPS20P24-201ENST00000457473 361 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 AC021205.2-201ENST00000480069 347 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.39□□□□□ -1.87
PTPN6P29350 KLRA1P-201ENST00000503499 986 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.39□□□□□ -1.87
PTPN6P29350 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PTPN6P29350 HMGN1P11-201ENST00000508668 303 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 SNORA19.3-201ENST00000516165 130 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 RNU1-95P-201ENST00000516357 160 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 RNU1-128P-201ENST00000516704 160 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 AC027309.2-201ENST00000520566 192 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.39□□□□□ -1.87
PTPN6P29350 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.39□□□□□ -1.87
PTPN6P29350 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PTPN6P29350 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.39□□□□□ -1.87
PTPN6P29350 AC006329.2-201ENST00000611491 394 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 AL592295.2-201ENST00000612578 206 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 AC018755.4-201ENST00000619715 454 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PTPN6P29350 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PTPN6P29350 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PTPN6P29350 AC244517.1-201ENST00000606030 2086 ntBASIC3.39□□□□□ -1.87
PTPN6P29350 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.39□□□□□ -1.87
PTPN6P29350 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PTPN6P29350 AC021755.1-201ENST00000559747 1447 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPN6P29350 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPN6P29350 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PTPN6P29350 MIR30E-201ENST00000362104 92 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 RNU6-657P-201ENST00000383904 107 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 SNORD65.1-201ENST00000390889 71 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.38□□□□□ -1.87
PTPN6P29350 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.38□□□□□ -1.87
PTPN6P29350 AL049610.1-201ENST00000423374 372 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.38□□□□□ -1.87
PTPN6P29350 AC006946.1-201ENST00000429106 328 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 GOT2P5-201ENST00000433995 546 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PTPN6P29350 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PTPN6P29350 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.38□□□□□ -1.87
PTPN6P29350 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.38□□□□□ -1.87
PTPN6P29350 PTGES3P5-201ENST00000455109 434 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PTPN6P29350 U3.44-201ENST00000458938 192 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 SETP14-201ENST00000497538 873 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.38□□□□□ -1.87
PTPN6P29350 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.38□□□□□ -1.87
PTPN6P29350 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.38□□□□□ -1.87
PTPN6P29350 NDUFB9P3-201ENST00000521269 501 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 AP000926.4-201ENST00000527351 454 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.38□□□□□ -1.87
PTPN6P29350 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.38□□□□□ -1.87
PTPN6P29350 AC124312.4-201ENST00000605533 310 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 AC091946.2-201ENST00000606105 291 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 AC008121.2-201ENST00000614647 523 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 AC231759.1-201ENST00000616455 597 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.38□□□□□ -1.87
PTPN6P29350 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PTPN6P29350 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PTPN6P29350 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.38□□□□□ -1.87
PTPN6P29350 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
PTPN6P29350 MTND4P9-201ENST00000507819 1346 ntBASIC3.38□□□□□ -1.87
PTPN6P29350 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms