Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
APCP25054 AC025125.1-201ENST00000624743 1922 ntBASIC1.95□□□□□ -2.1
APCP25054 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
APCP25054 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
APCP25054 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.95□□□□□ -2.1
APCP25054 FAT1P1-201ENST00000406588 507 ntBASIC1.95□□□□□ -2.1
APCP25054 AL590084.1-201ENST00000407885 387 ntBASIC1.95□□□□□ -2.1
APCP25054 RNA5SP270-201ENST00000411361 118 ntBASIC1.95□□□□□ -2.1
APCP25054 AC080125.1-201ENST00000414888 684 ntBASIC1.95□□□□□ -2.1
APCP25054 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.95□□□□□ -2.1
APCP25054 CKS1BP7-201ENST00000522230 235 ntBASIC1.95□□□□□ -2.1
APCP25054 ELOCP31-201ENST00000540463 467 ntBASIC1.95□□□□□ -2.1
APCP25054 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.95□□□□□ -2.1
APCP25054 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
APCP25054 AL109809.4-201ENST00000603520 2185 ntBASIC1.94□□□□□ -2.1
APCP25054 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.94□□□□□ -2.1
APCP25054 SNORA11.4-201ENST00000408823 129 ntBASIC1.94□□□□□ -2.1
APCP25054 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.94□□□□□ -2.1
APCP25054 AL158825.1-201ENST00000414735 521 ntBASIC1.94□□□□□ -2.1
APCP25054 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.94□□□□□ -2.1
APCP25054 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.94□□□□□ -2.1
APCP25054 AC008083.2-201ENST00000546707 476 ntBASIC1.94□□□□□ -2.1
APCP25054 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.94□□□□□ -2.1
APCP25054 AP006437.1-201ENST00000641440 3685 ntBASIC1.94□□□□□ -2.1
APCP25054 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
APCP25054 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.94□□□□□ -2.1
APCP25054 RNU1-91P-201ENST00000364746 163 ntBASIC1.94□□□□□ -2.1
APCP25054 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.94□□□□□ -2.1
APCP25054 AMD1P2-201ENST00000412936 992 ntBASIC1.94□□□□□ -2.1
APCP25054 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
APCP25054 BTF3P4-201ENST00000418852 495 ntBASIC1.94□□□□□ -2.1
APCP25054 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC1.94□□□□□ -2.1
APCP25054 PTP4A1P7-201ENST00000423476 514 ntBASIC1.94□□□□□ -2.1
APCP25054 CR769767.1-201ENST00000436337 346 ntBASIC1.94□□□□□ -2.1
APCP25054 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.94□□□□□ -2.1
APCP25054 COX6CP2-201ENST00000444980 225 ntBASIC1.94□□□□□ -2.1
APCP25054 TVP23BP2-201ENST00000455082 615 ntBASIC1.94□□□□□ -2.1
APCP25054 AP004217.1-201ENST00000480579 346 ntBASIC1.94□□□□□ -2.1
APCP25054 AC104090.1-201ENST00000506341 1171 ntBASIC1.94□□□□□ -2.1
APCP25054 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.94□□□□□ -2.1
APCP25054 AC021733.2-201ENST00000518830 497 ntBASIC1.94□□□□□ -2.1
APCP25054 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.94□□□□□ -2.1
APCP25054 RN7SL622P-201ENST00000585292 275 ntBASIC1.94□□□□□ -2.1
APCP25054 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.94□□□□□ -2.1
APCP25054 AC008121.2-201ENST00000614647 523 ntBASIC1.94□□□□□ -2.1
APCP25054 AC010378.1-201ENST00000619270 362 ntBASIC1.94□□□□□ -2.1
APCP25054 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC1.94□□□□□ -2.1
APCP25054 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
APCP25054 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.93□□□□□ -2.1
APCP25054 MTND5P28-201ENST00000438005 1594 ntBASIC1.93□□□□□ -2.1
APCP25054 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
APCP25054 MIR583-201ENST00000384846 75 ntBASIC1.93□□□□□ -2.1
APCP25054 MIR1276-201ENST00000408707 83 ntBASIC1.93□□□□□ -2.1
APCP25054 AL035551.1-201ENST00000446931 348 ntBASIC1.93□□□□□ -2.1
APCP25054 TRMT112P2-201ENST00000512910 132 ntBASIC1.93□□□□□ -2.1
APCP25054 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.93□□□□□ -2.1
APCP25054 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.93□□□□□ -2.1
APCP25054 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.93□□□□□ -2.1
APCP25054 AP004372.1-201ENST00000604842 844 ntBASIC1.93□□□□□ -2.1
APCP25054 AC002064.3-201ENST00000623448 346 ntBASIC1.93□□□□□ -2.1
APCP25054 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
APCP25054 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC1.93□□□□□ -2.1
APCP25054 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
APCP25054 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
APCP25054 PPIAP17-201ENST00000438507 471 ntBASIC1.93□□□□□ -2.1
APCP25054 VN1R17P-201ENST00000472048 1090 ntBASIC1.93□□□□□ -2.1
APCP25054 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.93□□□□□ -2.1
APCP25054 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.93□□□□□ -2.1
APCP25054 NDUFA5P6-201ENST00000542110 379 ntBASIC1.93□□□□□ -2.1
APCP25054 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.93□□□□□ -2.1
APCP25054 BMS1P7-201ENST00000602440 1052 ntBASIC1.93□□□□□ -2.1
APCP25054 AL451049.1-201ENST00000608672 497 ntBASIC1.93□□□□□ -2.1
APCP25054 AC093831.2-201ENST00000624393 3427 ntBASIC1.93□□□□□ -2.1
APCP25054 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
APCP25054 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
APCP25054 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.92□□□□□ -2.1
APCP25054 RNU2-2P-201ENST00000410396 191 ntBASIC1.92□□□□□ -2.1
APCP25054 AL139156.1-201ENST00000412785 841 ntBASIC1.92□□□□□ -2.1
APCP25054 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC1.92□□□□□ -2.1
APCP25054 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.92□□□□□ -2.1
APCP25054 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.92□□□□□ -2.1
APCP25054 U2.15-201ENST00000611544 191 ntBASIC1.92□□□□□ -2.1
APCP25054 U2.16-201ENST00000613119 191 ntBASIC1.92□□□□□ -2.1
APCP25054 U2.12-201ENST00000613778 191 ntBASIC1.92□□□□□ -2.1
APCP25054 U2.20-201ENST00000613956 192 ntBASIC1.92□□□□□ -2.1
APCP25054 U2.9-201ENST00000615427 191 ntBASIC1.92□□□□□ -2.1
APCP25054 U2.11-201ENST00000616345 191 ntBASIC1.92□□□□□ -2.1
APCP25054 U2.2-201ENST00000616535 191 ntBASIC1.92□□□□□ -2.1
APCP25054 U2.3-201ENST00000617785 191 ntBASIC1.92□□□□□ -2.1
APCP25054 U2.19-201ENST00000618602 191 ntBASIC1.92□□□□□ -2.1
APCP25054 RNU2-1-201ENST00000618664 191 ntBASIC1.92□□□□□ -2.1
APCP25054 U2.6-201ENST00000619225 191 ntBASIC1.92□□□□□ -2.1
APCP25054 U2.5-201ENST00000619465 191 ntBASIC1.92□□□□□ -2.1
APCP25054 U2.10-201ENST00000620268 191 ntBASIC1.92□□□□□ -2.1
APCP25054 AC092628.2-201ENST00000622492 339 ntBASIC1.92□□□□□ -2.1
APCP25054 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
APCP25054 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
APCP25054 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
APCP25054 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
APCP25054 RNA5SP383-201ENST00000362934 120 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms