Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.64□□□□□ -1.67
POLR2AP24928 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.64□□□□□ -1.67
POLR2AP24928 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.64□□□□□ -1.67
POLR2AP24928 AL451044.1-201ENST00000604867 238 ntBASIC4.64□□□□□ -1.67
POLR2AP24928 AC104458.1-201ENST00000608243 463 ntBASIC4.64□□□□□ -1.67
POLR2AP24928 AC023158.2-201ENST00000614876 543 ntBASIC4.64□□□□□ -1.67
POLR2AP24928 AL138721.1-201ENST00000616756 179 ntBASIC4.64□□□□□ -1.67
POLR2AP24928 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
POLR2AP24928 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
POLR2AP24928 AP002512.4-202ENST00000641599 4530 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
POLR2AP24928 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
POLR2AP24928 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
POLR2AP24928 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
POLR2AP24928 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
POLR2AP24928 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.63□□□□□ -1.67
POLR2AP24928 RNU6-1066P-201ENST00000363573 105 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 EEF1A1P40-201ENST00000412883 573 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 AIMP1P1-201ENST00000418670 937 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.63□□□□□ -1.67
POLR2AP24928 AL513174.1-201ENST00000423182 629 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.63□□□□□ -1.67
POLR2AP24928 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.63□□□□□ -1.67
POLR2AP24928 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.63□□□□□ -1.67
POLR2AP24928 RPL7P29-201ENST00000437151 728 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 RABEPKP1-201ENST00000440529 1026 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 AC092001.1-201ENST00000453012 261 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
POLR2AP24928 AC008628.2-201ENST00000502605 298 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.63□□□□□ -1.67
POLR2AP24928 AP004247.1-201ENST00000531556 1289 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.63□□□□□ -1.67
POLR2AP24928 AL359219.2-201ENST00000555184 348 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.63□□□□□ -1.67
POLR2AP24928 MIR5697-201ENST00000578045 78 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.63□□□□□ -1.67
POLR2AP24928 BNIP3P8-201ENST00000597863 560 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 AC005344.1-201ENST00000613391 459 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 AL136221.1-201ENST00000621449 509 ntBASIC4.63□□□□□ -1.67
POLR2AP24928 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.62□□□□□ -1.67
POLR2AP24928 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
POLR2AP24928 DBF4P1-201ENST00000412976 1892 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 SNORD35B-201ENST00000363660 87 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 SNORA48.2-201ENST00000390926 124 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
POLR2AP24928 Y_RNA.598-201ENST00000410480 95 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 OR51A3P-201ENST00000413596 924 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 OFD1P18Y-201ENST00000420889 959 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AC073335.1-201ENST00000427776 363 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.62□□□□□ -1.67
POLR2AP24928 HMGB3P10-201ENST00000434734 572 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 PSMC1P13-201ENST00000458195 985 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.62□□□□□ -1.67
POLR2AP24928 OR5H5P-201ENST00000503164 928 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AC104108.1-201ENST00000509930 412 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 RNU6-358P-201ENST00000516564 75 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AP001893.2-201ENST00000526949 202 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.62□□□□□ -1.67
POLR2AP24928 OR7K1P-201ENST00000546439 926 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.62□□□□□ -1.67
POLR2AP24928 ATP5F1P7-201ENST00000567330 760 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 RPL23AP87-202ENST00000573039 466 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AC005034.5-201ENST00000604219 466 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AL137849.1-201ENST00000604767 169 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.62□□□□□ -1.67
POLR2AP24928 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.62□□□□□ -1.67
POLR2AP24928 MTND1P37-201ENST00000636562 264 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
POLR2AP24928 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
POLR2AP24928 GTF2H2B-203ENST00000508065 1432 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AC092111.2-201ENST00000611627 1414 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
POLR2AP24928 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
POLR2AP24928 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.62□□□□□ -1.67
POLR2AP24928 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
POLR2AP24928 AC117529.2-201ENST00000512159 2068 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
POLR2AP24928 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
POLR2AP24928 Y_RNA.9-201ENST00000362354 101 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 RNVU1-14-201ENST00000384770 164 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 RPS24P12-201ENST00000402084 394 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 FCF1P2-201ENST00000415284 583 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 RPS23P10-201ENST00000416185 486 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.62□□□□□ -1.67
POLR2AP24928 MTCYBP24-201ENST00000420387 1106 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.62□□□□□ -1.67
POLR2AP24928 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.62□□□□□ -1.67
POLR2AP24928 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.62□□□□□ -1.67
POLR2AP24928 RPS26P2-201ENST00000440331 348 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.62□□□□□ -1.67
POLR2AP24928 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.62□□□□□ -1.67
POLR2AP24928 MTCO2P30-201ENST00000503662 364 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 OR5AQ1P-201ENST00000527596 927 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 FAM92A1P1-201ENST00000528023 890 ntBASIC4.62□□□□□ -1.67
POLR2AP24928 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
POLR2AP24928 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.62□□□□□ -1.67
POLR2AP24928 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms