Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH3P22223 AC007389.2-201ENST00000434630 306 ntBASIC3.74□□□□□ -1.81
CDH3P22223 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH3P22223 AC083863.1-201ENST00000438811 231 ntBASIC3.74□□□□□ -1.81
CDH3P22223 MTCYBP31-201ENST00000438855 1122 ntBASIC3.74□□□□□ -1.81
CDH3P22223 SNORA71B-202ENST00000439232 272 ntBASIC3.74□□□□□ -1.81
CDH3P22223 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH3P22223 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH3P22223 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH3P22223 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH3P22223 SNORA84-201ENST00000459229 133 ntBASIC3.74□□□□□ -1.81
CDH3P22223 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH3P22223 AC004263.1-201ENST00000479327 332 ntBASIC3.74□□□□□ -1.81
CDH3P22223 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
CDH3P22223 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH3P22223 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDH3P22223 AC109445.1-201ENST00000512356 383 ntBASIC3.74□□□□□ -1.81
CDH3P22223 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH3P22223 AC104057.1-201ENST00000515547 497 ntBASIC3.74□□□□□ -1.81
CDH3P22223 MTATP6P15-201ENST00000527233 835 ntBASIC3.74□□□□□ -1.81
CDH3P22223 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH3P22223 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH3P22223 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH3P22223 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.74□□□□□ -1.81
CDH3P22223 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
CDH3P22223 OR4K7P-201ENST00000580232 945 ntBASIC3.74□□□□□ -1.81
CDH3P22223 CLIC4P2-201ENST00000601934 717 ntBASIC3.74□□□□□ -1.81
CDH3P22223 AL450489.1-201ENST00000612071 468 ntBASIC3.74□□□□□ -1.81
CDH3P22223 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.74□□□□□ -1.81
CDH3P22223 RNVU1-4-201ENST00000612985 164 ntBASIC3.74□□□□□ -1.81
CDH3P22223 AC092628.2-201ENST00000622492 339 ntBASIC3.74□□□□□ -1.81
CDH3P22223 AC017037.3-201ENST00000625016 472 ntBASIC3.74□□□□□ -1.81
CDH3P22223 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH3P22223 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.74□□□□□ -1.81
CDH3P22223 AC097655.1-201ENST00000635075 318 ntBASIC3.74□□□□□ -1.81
CDH3P22223 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.74□□□□□ -1.81
CDH3P22223 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CDH3P22223 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH3P22223 AC024560.2-201ENST00000507981 1497 ntBASIC3.73□□□□□ -1.81
CDH3P22223 CDR1-202ENST00000625883 1485 ntBASIC3.73□□□□□ -1.81
CDH3P22223 AL122126.1-201ENST00000546905 1318 ntBASIC3.73□□□□□ -1.81
CDH3P22223 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CDH3P22223 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH3P22223 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
CDH3P22223 RNU6-216P-201ENST00000363282 104 ntBASIC3.73□□□□□ -1.81
CDH3P22223 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CDH3P22223 MIR506-201ENST00000384998 124 ntBASIC3.73□□□□□ -1.81
CDH3P22223 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.73□□□□□ -1.81
CDH3P22223 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH3P22223 BTBD10P2-201ENST00000404779 676 ntBASIC3.73□□□□□ -1.81
CDH3P22223 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH3P22223 RNU2-28P-201ENST00000410457 189 ntBASIC3.73□□□□□ -1.81
CDH3P22223 AC073264.1-201ENST00000411508 416 ntBASIC3.73□□□□□ -1.81
CDH3P22223 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH3P22223 AC244098.2-201ENST00000422068 99 ntBASIC3.73□□□□□ -1.81
CDH3P22223 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH3P22223 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH3P22223 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH3P22223 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH3P22223 MTND3P1-201ENST00000441336 220 ntBASIC3.73□□□□□ -1.81
CDH3P22223 TXNP1-201ENST00000441872 371 ntBASIC3.73□□□□□ -1.81
CDH3P22223 Z77249.1-201ENST00000444622 1175 ntBASIC3.73□□□□□ -1.81
CDH3P22223 Z95327.1-201ENST00000446082 482 ntBASIC3.73□□□□□ -1.81
CDH3P22223 MTCO1P48-201ENST00000448024 1096 ntBASIC3.73□□□□□ -1.81
CDH3P22223 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH3P22223 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH3P22223 MTCO3P2-201ENST00000457365 171 ntBASIC3.73□□□□□ -1.81
CDH3P22223 VN1R17P-201ENST00000472048 1090 ntBASIC3.73□□□□□ -1.81
CDH3P22223 KLRA1P-201ENST00000503499 986 ntBASIC3.73□□□□□ -1.81
CDH3P22223 AC010587.2-201ENST00000511727 448 ntBASIC3.73□□□□□ -1.81
CDH3P22223 RNU6-352P-201ENST00000516908 107 ntBASIC3.73□□□□□ -1.81
CDH3P22223 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH3P22223 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH3P22223 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.73□□□□□ -1.81
CDH3P22223 AC125611.1-201ENST00000549563 229 ntBASIC3.73□□□□□ -1.81
CDH3P22223 ZNF321P-202ENST00000550843 495 ntBASIC3.73□□□□□ -1.81
CDH3P22223 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH3P22223 MTND3P12-201ENST00000559068 328 ntBASIC3.73□□□□□ -1.81
CDH3P22223 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH3P22223 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.73□□□□□ -1.81
CDH3P22223 MIR3690-201ENST00000580266 75 ntBASIC3.73□□□□□ -1.81
CDH3P22223 SNRPGP15-201ENST00000600149 222 ntBASIC3.73□□□□□ -1.81
CDH3P22223 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.73□□□□□ -1.81
CDH3P22223 ELOCP35-201ENST00000604289 336 ntBASIC3.73□□□□□ -1.81
CDH3P22223 AL158042.1-201ENST00000605338 460 ntBASIC3.73□□□□□ -1.81
CDH3P22223 PLCE1P1-201ENST00000622094 305 ntBASIC3.73□□□□□ -1.81
CDH3P22223 AC019226.2-201ENST00000625973 424 ntBASIC3.73□□□□□ -1.81
CDH3P22223 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDH3P22223 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDH3P22223 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CDH3P22223 AC093908.1-201ENST00000623125 8092 ntBASIC3.73□□□□□ -1.81
CDH3P22223 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CDH3P22223 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CDH3P22223 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
CDH3P22223 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH3P22223 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDH3P22223 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDH3P22223 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDH3P22223 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CDH3P22223 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms