Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 RNA5SP42-201ENST00000364278 115 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 RNA5SP51-201ENST00000364750 119 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 SNRPEP2-201ENST00000397592 279 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 U3.39-201ENST00000408569 239 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 UBE2D3P2-201ENST00000424409 445 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 MTCO1P39-201ENST00000426148 480 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 HIGD1AP11-201ENST00000438361 280 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 USP9YP34-201ENST00000453983 808 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 RPL21P129-201ENST00000491732 478 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AP002812.1-201ENST00000495378 474 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 SNORA67.7-201ENST00000516664 135 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 PAICSP4-201ENST00000517543 1253 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 MIR3158-1-201ENST00000583596 81 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AC006116.7-201ENST00000590141 756 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AC106028.5-201ENST00000610332 395 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AC005332.6-201ENST00000613178 446 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AL138955.1-201ENST00000622881 1040 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 AP003355.3-201ENST00000623465 114 ntBASIC3.63□□□□□ -1.83
HLA-DPA1P20036 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.63□□□□□ -1.83
HLA-DPA1P20036 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 ZNF285B-201ENST00000561698 1767 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 RNU6-224P-201ENST00000384055 107 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 RNU6-1257P-201ENST00000384625 110 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 MIR200C-201ENST00000384980 68 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 RPL21P17-201ENST00000397467 475 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AL035423.1-201ENST00000420331 213 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 OSTCP5-201ENST00000425293 453 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 RPL23AP74-201ENST00000437246 471 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 MTCYBP34-201ENST00000439552 670 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AL589880.1-201ENST00000448271 287 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 SNORD105B-201ENST00000458770 79 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AC087312.1-201ENST00000471411 480 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AC023598.1-201ENST00000472521 361 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 ST13P14-201ENST00000474095 734 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 OR5AP1P-201ENST00000529730 940 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AC125611.1-201ENST00000549563 229 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 CYCSP41-201ENST00000616920 296 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 AL645937.1-201ENST00000641739 1652 ntBASIC3.62□□□□□ -1.83
HLA-DPA1P20036 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HLA-DPA1P20036 ZNF807-201ENST00000328088 1707 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 AP005901.5-201ENST00000545779 1796 ntBASIC3.61□□□□□ -1.83
HLA-DPA1P20036 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HLA-DPA1P20036 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms