Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL807761.1-201ENST00000417622 171 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AC019097.1-201ENST00000424783 735 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AC093655.2-201ENST00000425735 631 ntBASIC5.8□□□□□ -1.48
LIG1P18858 BX323845.1-201ENST00000432417 179 ntBASIC5.8□□□□□ -1.48
LIG1P18858 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.8□□□□□ -1.48
LIG1P18858 AL627308.1-201ENST00000435693 821 ntBASIC5.8□□□□□ -1.48
LIG1P18858 RPS29P10-201ENST00000439197 166 ntBASIC5.8□□□□□ -1.48
LIG1P18858 BNIP3P2-201ENST00000441221 577 ntBASIC5.8□□□□□ -1.48
LIG1P18858 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.8□□□□□ -1.48
LIG1P18858 Z92846.1-201ENST00000456203 268 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AP001025.2-201ENST00000490908 477 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AC073073.1-201ENST00000493920 463 ntBASIC5.8□□□□□ -1.48
LIG1P18858 RPL38P4-201ENST00000502376 214 ntBASIC5.8□□□□□ -1.48
LIG1P18858 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.8□□□□□ -1.48
LIG1P18858 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.8□□□□□ -1.48
LIG1P18858 Y_RNA.691-201ENST00000516611 103 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.8□□□□□ -1.48
LIG1P18858 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.8□□□□□ -1.48
LIG1P18858 RPL23AP53-201ENST00000521854 457 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.8□□□□□ -1.48
LIG1P18858 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LIG1P18858 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.8□□□□□ -1.48
LIG1P18858 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.8□□□□□ -1.48
LIG1P18858 AC022882.1-201ENST00000532142 501 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LIG1P18858 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.8□□□□□ -1.48
LIG1P18858 AC044860.2-201ENST00000561005 179 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.8□□□□□ -1.48
LIG1P18858 AC007448.1-201ENST00000582714 234 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AC006504.6-201ENST00000590142 199 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.8□□□□□ -1.48
LIG1P18858 BBIP1P1-201ENST00000602999 279 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AL355802.3-201ENST00000607571 545 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AC211433.2-201ENST00000608433 387 ntBASIC5.8□□□□□ -1.48
LIG1P18858 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LIG1P18858 AC079684.1-201ENST00000621405 437 ntBASIC5.8□□□□□ -1.48
LIG1P18858 AC091953.2-201ENST00000623979 160 ntBASIC5.8□□□□□ -1.48
LIG1P18858 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIG1P18858 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LIG1P18858 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.8□□□□□ -1.48
LIG1P18858 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LIG1P18858 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.8□□□□□ -1.48
LIG1P18858 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LIG1P18858 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LIG1P18858 MTND4P35-201ENST00000604257 1375 ntBASIC5.8□□□□□ -1.48
LIG1P18858 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.79□□□□□ -1.48
LIG1P18858 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.79□□□□□ -1.48
LIG1P18858 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LIG1P18858 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.79□□□□□ -1.48
LIG1P18858 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LIG1P18858 SNORA63C-201ENST00000364578 129 ntBASIC5.79□□□□□ -1.48
LIG1P18858 RNU6-343P-201ENST00000364709 104 ntBASIC5.79□□□□□ -1.48
LIG1P18858 Y_RNA.384-201ENST00000383909 102 ntBASIC5.79□□□□□ -1.48
LIG1P18858 SNORA2.3-201ENST00000383920 135 ntBASIC5.79□□□□□ -1.48
LIG1P18858 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LIG1P18858 RPL32P23-201ENST00000397237 405 ntBASIC5.79□□□□□ -1.48
LIG1P18858 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIG1P18858 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.79□□□□□ -1.48
LIG1P18858 GSTM3P2-201ENST00000412746 530 ntBASIC5.79□□□□□ -1.48
LIG1P18858 AL138785.1-201ENST00000425821 331 ntBASIC5.79□□□□□ -1.48
LIG1P18858 COX6CP13-201ENST00000428703 226 ntBASIC5.79□□□□□ -1.48
LIG1P18858 RPS15AP9-201ENST00000439856 381 ntBASIC5.79□□□□□ -1.48
LIG1P18858 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.79□□□□□ -1.48
LIG1P18858 BRK1P2-201ENST00000442875 223 ntBASIC5.79□□□□□ -1.48
LIG1P18858 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LIG1P18858 TCEA1P1-201ENST00000449716 880 ntBASIC5.79□□□□□ -1.48
LIG1P18858 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.79□□□□□ -1.48
LIG1P18858 RPS4XP18-201ENST00000495480 763 ntBASIC5.79□□□□□ -1.48
LIG1P18858 RN7SL808P-201ENST00000496066 299 ntBASIC5.79□□□□□ -1.48
LIG1P18858 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.79□□□□□ -1.48
LIG1P18858 SOD1P3-201ENST00000518682 454 ntBASIC5.79□□□□□ -1.48
LIG1P18858 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.79□□□□□ -1.48
LIG1P18858 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.79□□□□□ -1.48
LIG1P18858 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.79□□□□□ -1.48
LIG1P18858 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.79□□□□□ -1.48
LIG1P18858 AC005668.1-201ENST00000571142 476 ntBASIC5.79□□□□□ -1.48
LIG1P18858 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.79□□□□□ -1.48
LIG1P18858 AC008638.3-201ENST00000603341 463 ntBASIC5.79□□□□□ -1.48
LIG1P18858 AC010591.1-201ENST00000603941 649 ntBASIC5.79□□□□□ -1.48
LIG1P18858 BX323046.1-201ENST00000610145 535 ntBASIC5.79□□□□□ -1.48
LIG1P18858 RPSAP73-201ENST00000614820 330 ntBASIC5.79□□□□□ -1.48
LIG1P18858 AC022106.2-201ENST00000620114 757 ntBASIC5.79□□□□□ -1.48
LIG1P18858 AC068831.8-201ENST00000620171 435 ntBASIC5.79□□□□□ -1.48
LIG1P18858 AC090617.10-201ENST00000624308 134 ntBASIC5.79□□□□□ -1.48
LIG1P18858 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
LIG1P18858 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LIG1P18858 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
LIG1P18858 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
LIG1P18858 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIG1P18858 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIG1P18858 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LIG1P18858 PANDAR-201ENST00000629595 1506 ntBASIC5.79□□□□□ -1.48
LIG1P18858 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.78□□□□□ -1.48
LIG1P18858 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
LIG1P18858 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.78□□□□□ -1.48
LIG1P18858 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LIG1P18858 Y_RNA.422-201ENST00000384054 114 ntBASIC5.78□□□□□ -1.48
LIG1P18858 AL031679.1-201ENST00000400616 525 ntBASIC5.78□□□□□ -1.48
LIG1P18858 AL136116.1-201ENST00000403591 381 ntBASIC5.78□□□□□ -1.48
LIG1P18858 RPL31P52-201ENST00000407532 367 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms