Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.89□□□□□ -1.79
CFTRP13569 CR589904.2-201ENST00000612533 440 ntBASIC3.89□□□□□ -1.79
CFTRP13569 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CFTRP13569 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.89□□□□□ -1.79
CFTRP13569 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CFTRP13569 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CFTRP13569 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.88□□□□□ -1.79
CFTRP13569 RPS15AP28-201ENST00000435088 386 ntBASIC3.88□□□□□ -1.79
CFTRP13569 SCARNA16.3-201ENST00000516595 184 ntBASIC3.88□□□□□ -1.79
CFTRP13569 AC012119.1-201ENST00000603184 222 ntBASIC3.88□□□□□ -1.79
CFTRP13569 AC103710.3-201ENST00000608157 948 ntBASIC3.88□□□□□ -1.79
CFTRP13569 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.88□□□□□ -1.79
CFTRP13569 AC009501.3-201ENST00000605001 1352 ntBASIC3.88□□□□□ -1.79
CFTRP13569 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.88□□□□□ -1.79
CFTRP13569 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CFTRP13569 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CFTRP13569 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.87□□□□□ -1.79
CFTRP13569 AL592045.1-201ENST00000429867 352 ntBASIC3.87□□□□□ -1.79
CFTRP13569 UBE2V2P4-201ENST00000447495 259 ntBASIC3.87□□□□□ -1.79
CFTRP13569 RPL36AP33-201ENST00000450395 310 ntBASIC3.87□□□□□ -1.79
CFTRP13569 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.87□□□□□ -1.79
CFTRP13569 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CFTRP13569 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CFTRP13569 IPMKP1-201ENST00000425988 855 ntBASIC3.86□□□□□ -1.79
CFTRP13569 RPL23AP11-201ENST00000475260 469 ntBASIC3.86□□□□□ -1.79
CFTRP13569 AC012182.1-201ENST00000570133 895 ntBASIC3.86□□□□□ -1.79
CFTRP13569 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.86□□□□□ -1.79
CFTRP13569 BNIP3P8-201ENST00000597863 560 ntBASIC3.86□□□□□ -1.79
CFTRP13569 BX664608.1-201ENST00000610519 487 ntBASIC3.86□□□□□ -1.79
CFTRP13569 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CFTRP13569 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CFTRP13569 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.86□□□□□ -1.79
CFTRP13569 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.86□□□□□ -1.79
CFTRP13569 MTND5P28-201ENST00000438005 1594 ntBASIC3.86□□□□□ -1.79
CFTRP13569 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CFTRP13569 Y_RNA.338-201ENST00000365320 114 ntBASIC3.86□□□□□ -1.79
CFTRP13569 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CFTRP13569 SNORA67.3-201ENST00000384366 140 ntBASIC3.86□□□□□ -1.79
CFTRP13569 CYCSP49-201ENST00000420810 319 ntBASIC3.86□□□□□ -1.79
CFTRP13569 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.86□□□□□ -1.79
CFTRP13569 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.86□□□□□ -1.79
CFTRP13569 AC245517.2-201ENST00000442890 346 ntBASIC3.86□□□□□ -1.79
CFTRP13569 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.86□□□□□ -1.79
CFTRP13569 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.86□□□□□ -1.79
CFTRP13569 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.86□□□□□ -1.79
CFTRP13569 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.86□□□□□ -1.79
CFTRP13569 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.86□□□□□ -1.79
CFTRP13569 RNA5SP200-201ENST00000516360 103 ntBASIC3.86□□□□□ -1.79
CFTRP13569 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.86□□□□□ -1.79
CFTRP13569 AC021733.2-201ENST00000518830 497 ntBASIC3.86□□□□□ -1.79
CFTRP13569 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.86□□□□□ -1.79
CFTRP13569 AC022960.2-201ENST00000616300 666 ntBASIC3.86□□□□□ -1.79
CFTRP13569 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CFTRP13569 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CFTRP13569 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.85□□□□□ -1.79
CFTRP13569 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CFTRP13569 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CFTRP13569 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.85□□□□□ -1.79
CFTRP13569 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CFTRP13569 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.85□□□□□ -1.79
CFTRP13569 AP001521.1-201ENST00000609150 300 ntBASIC3.85□□□□□ -1.79
CFTRP13569 AC131238.1-201ENST00000617135 328 ntBASIC3.85□□□□□ -1.79
CFTRP13569 AC093908.1-201ENST00000623125 8092 ntBASIC3.84□□□□□ -1.79
CFTRP13569 MIR142-201ENST00000384835 87 ntBASIC3.84□□□□□ -1.8
CFTRP13569 RNA5SP213-201ENST00000391031 106 ntBASIC3.84□□□□□ -1.8
CFTRP13569 SNORA17.3-201ENST00000391159 129 ntBASIC3.84□□□□□ -1.8
CFTRP13569 XKRY-201ENST00000510392 1100 ntBASIC3.84□□□□□ -1.8
CFTRP13569 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.84□□□□□ -1.8
CFTRP13569 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.84□□□□□ -1.8
CFTRP13569 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.84□□□□□ -1.8
CFTRP13569 TP73-AS1.1-201ENST00000611447 161 ntBASIC3.84□□□□□ -1.8
CFTRP13569 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.84□□□□□ -1.8
CFTRP13569 AC080128.1-201ENST00000474389 1917 ntBASIC3.84□□□□□ -1.8
CFTRP13569 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.83□□□□□ -1.8
CFTRP13569 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.83□□□□□ -1.8
CFTRP13569 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.83□□□□□ -1.8
CFTRP13569 AL445437.1-201ENST00000623157 3087 ntBASIC3.83□□□□□ -1.8
CFTRP13569 Y_RNA.595-201ENST00000410403 105 ntBASIC3.83□□□□□ -1.8
CFTRP13569 RNU2-6P-201ENST00000411404 190 ntBASIC3.83□□□□□ -1.8
CFTRP13569 MTATP6P11-201ENST00000428071 670 ntBASIC3.83□□□□□ -1.8
CFTRP13569 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.83□□□□□ -1.8
CFTRP13569 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.83□□□□□ -1.8
CFTRP13569 AP000926.3-201ENST00000497201 299 ntBASIC3.83□□□□□ -1.8
CFTRP13569 AC068339.2-201ENST00000534395 618 ntBASIC3.83□□□□□ -1.8
CFTRP13569 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.83□□□□□ -1.8
CFTRP13569 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.83□□□□□ -1.8
CFTRP13569 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.83□□□□□ -1.8
CFTRP13569 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.83□□□□□ -1.8
CFTRP13569 AL139286.1-201ENST00000604465 483 ntBASIC3.83□□□□□ -1.8
CFTRP13569 AC009831.4-201ENST00000620744 325 ntBASIC3.83□□□□□ -1.8
CFTRP13569 AL356266.1-201ENST00000623311 483 ntBASIC3.83□□□□□ -1.8
CFTRP13569 AL359893.1-201ENST00000447628 1580 ntBASIC3.83□□□□□ -1.8
CFTRP13569 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CFTRP13569 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
CFTRP13569 RNU1-17P-201ENST00000363022 152 ntBASIC3.82□□□□□ -1.8
CFTRP13569 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.82□□□□□ -1.8
CFTRP13569 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CFTRP13569 SNORA79B-201ENST00000410557 148 ntBASIC3.82□□□□□ -1.8
CFTRP13569 AC234781.4-201ENST00000419384 244 ntBASIC3.82□□□□□ -1.8
CFTRP13569 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms