Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC006270.2-201ENST00000578523 652 ntBASIC4.01□□□□□ -1.77
PCNAP12004 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.01□□□□□ -1.77
PCNAP12004 U73023.1-201ENST00000603134 700 ntBASIC4.01□□□□□ -1.77
PCNAP12004 AC004987.4-201ENST00000603383 338 ntBASIC4.01□□□□□ -1.77
PCNAP12004 ARF4P1-201ENST00000605447 541 ntBASIC4.01□□□□□ -1.77
PCNAP12004 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.01□□□□□ -1.77
PCNAP12004 AC114781.5-201ENST00000615297 108 ntBASIC4.01□□□□□ -1.77
PCNAP12004 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.01□□□□□ -1.77
PCNAP12004 PABPC1P9-201ENST00000426076 1612 ntBASIC4.01□□□□□ -1.77
PCNAP12004 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCNAP12004 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCNAP12004 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCNAP12004 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.01□□□□□ -1.77
PCNAP12004 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4□□□□□ -1.77
PCNAP12004 DCAF13P1-201ENST00000495256 1330 ntBASIC4□□□□□ -1.77
PCNAP12004 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4□□□□□ -1.77
PCNAP12004 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4□□□□□ -1.77
PCNAP12004 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCNAP12004 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCNAP12004 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4□□□□□ -1.77
PCNAP12004 AL031679.1-201ENST00000400616 525 ntBASIC4□□□□□ -1.77
PCNAP12004 TANK-206ENST00000406287 875 ntTSL 5 BASIC4□□□□□ -1.77
PCNAP12004 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4□□□□□ -1.77
PCNAP12004 FNDC3CP-201ENST00000420795 1155 ntBASIC4□□□□□ -1.77
PCNAP12004 RPL23AP38-201ENST00000423801 469 ntBASIC4□□□□□ -1.77
PCNAP12004 BX119904.4-201ENST00000424402 301 ntBASIC4□□□□□ -1.77
PCNAP12004 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4□□□□□ -1.77
PCNAP12004 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4□□□□□ -1.77
PCNAP12004 AC244035.1-201ENST00000430042 390 ntBASIC4□□□□□ -1.77
PCNAP12004 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4□□□□□ -1.77
PCNAP12004 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4□□□□□ -1.77
PCNAP12004 MTND1P30-201ENST00000441241 901 ntBASIC4□□□□□ -1.77
PCNAP12004 TPT1P13-201ENST00000449760 499 ntBASIC4□□□□□ -1.77
PCNAP12004 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCNAP12004 RAD23BP3-201ENST00000454157 1152 ntBASIC4□□□□□ -1.77
PCNAP12004 RPL31P50-201ENST00000471002 296 ntBASIC4□□□□□ -1.77
PCNAP12004 AC017015.1-201ENST00000477387 286 ntBASIC4□□□□□ -1.77
PCNAP12004 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4□□□□□ -1.77
PCNAP12004 AC041039.1-201ENST00000485656 536 ntBASIC4□□□□□ -1.77
PCNAP12004 AC109486.1-201ENST00000486833 374 ntBASIC4□□□□□ -1.77
PCNAP12004 AC078817.1-201ENST00000492623 435 ntBASIC4□□□□□ -1.77
PCNAP12004 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4□□□□□ -1.77
PCNAP12004 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4□□□□□ -1.77
PCNAP12004 AC108475.1-201ENST00000507880 950 ntBASIC4□□□□□ -1.77
PCNAP12004 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4□□□□□ -1.77
PCNAP12004 RAB9BP1-201ENST00000519581 626 ntBASIC4□□□□□ -1.77
PCNAP12004 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4□□□□□ -1.77
PCNAP12004 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4□□□□□ -1.77
PCNAP12004 AP004242.1-201ENST00000533701 349 ntBASIC4□□□□□ -1.77
PCNAP12004 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4□□□□□ -1.77
PCNAP12004 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4□□□□□ -1.77
PCNAP12004 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4□□□□□ -1.77
PCNAP12004 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4□□□□□ -1.77
PCNAP12004 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4□□□□□ -1.77
PCNAP12004 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4□□□□□ -1.77
PCNAP12004 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4□□□□□ -1.77
PCNAP12004 ACTR3BP3-201ENST00000565577 979 ntBASIC4□□□□□ -1.77
PCNAP12004 RPL23AP87-202ENST00000573039 466 ntBASIC4□□□□□ -1.77
PCNAP12004 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4□□□□□ -1.77
PCNAP12004 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4□□□□□ -1.77
PCNAP12004 NBR2-204ENST00000587322 63 ntBASIC4□□□□□ -1.77
PCNAP12004 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4□□□□□ -1.77
PCNAP12004 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCNAP12004 AL161729.3-201ENST00000603533 673 ntBASIC4□□□□□ -1.77
PCNAP12004 AL451044.1-201ENST00000604867 238 ntBASIC4□□□□□ -1.77
PCNAP12004 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4□□□□□ -1.77
PCNAP12004 MIR7844-201ENST00000616161 122 ntBASIC4□□□□□ -1.77
PCNAP12004 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4□□□□□ -1.77
PCNAP12004 AC127502.3-201ENST00000636170 1206 ntBASIC4□□□□□ -1.77
PCNAP12004 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCNAP12004 HSPA8P1-201ENST00000425843 1833 ntBASIC4□□□□□ -1.77
PCNAP12004 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCNAP12004 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCNAP12004 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.99□□□□□ -1.77
PCNAP12004 USP8P1-201ENST00000494673 3183 ntBASIC3.99□□□□□ -1.77
PCNAP12004 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCNAP12004 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCNAP12004 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PCNAP12004 RPL23AP57-201ENST00000332361 466 ntBASIC3.99□□□□□ -1.77
PCNAP12004 MIR383-201ENST00000362257 73 ntBASIC3.99□□□□□ -1.77
PCNAP12004 Y_RNA.51-201ENST00000362725 102 ntBASIC3.99□□□□□ -1.77
PCNAP12004 RNA5SP322-201ENST00000363617 119 ntBASIC3.99□□□□□ -1.77
PCNAP12004 RNU6-263P-201ENST00000363811 107 ntBASIC3.99□□□□□ -1.77
PCNAP12004 RNU1-32P-201ENST00000363937 159 ntBASIC3.99□□□□□ -1.77
PCNAP12004 RNA5SP366-201ENST00000365454 123 ntBASIC3.99□□□□□ -1.77
PCNAP12004 MTND4LP20-201ENST00000402379 270 ntBASIC3.99□□□□□ -1.77
PCNAP12004 RNU2-37P-201ENST00000410695 177 ntBASIC3.99□□□□□ -1.77
PCNAP12004 HMGB1P11-201ENST00000413899 637 ntBASIC3.99□□□□□ -1.77
PCNAP12004 AC016769.2-201ENST00000414815 475 ntBASIC3.99□□□□□ -1.77
PCNAP12004 AC005517.2-201ENST00000424673 553 ntBASIC3.99□□□□□ -1.77
PCNAP12004 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.99□□□□□ -1.77
PCNAP12004 PSMA6P3-201ENST00000428242 164 ntBASIC3.99□□□□□ -1.77
PCNAP12004 MED14P1-201ENST00000430517 648 ntBASIC3.99□□□□□ -1.77
PCNAP12004 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.99□□□□□ -1.77
PCNAP12004 RPL23AP74-201ENST00000437246 471 ntBASIC3.99□□□□□ -1.77
PCNAP12004 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.99□□□□□ -1.77
PCNAP12004 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.99□□□□□ -1.77
PCNAP12004 MTCO1P27-201ENST00000448269 226 ntBASIC3.99□□□□□ -1.77
PCNAP12004 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.99□□□□□ -1.77
PCNAP12004 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms