Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AC013476.2-201ENST00000614456 459 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.7□□□□□ -1.66
COL3A1P02461 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.7□□□□□ -1.66
COL3A1P02461 AC127502.3-201ENST00000636170 1206 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 MTND1P37-201ENST00000636562 264 ntBASIC4.7□□□□□ -1.66
COL3A1P02461 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.7□□□□□ -1.66
COL3A1P02461 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL3A1P02461 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
COL3A1P02461 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL3A1P02461 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL3A1P02461 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL3A1P02461 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
COL3A1P02461 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL3A1P02461 AC007685.1-201ENST00000329806 452 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AL672167.1-206ENST00000356293 943 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 Y_RNA.813-201ENST00000364639 102 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 Y_RNA.303-201ENST00000364998 94 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 Y_RNA.390-201ENST00000383932 102 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 GSTA12P-201ENST00000402398 508 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 RNU2-66P-201ENST00000410650 161 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.69□□□□□ -1.66
COL3A1P02461 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.69□□□□□ -1.66
COL3A1P02461 RPS26P47-201ENST00000427219 348 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.69□□□□□ -1.66
COL3A1P02461 AC073063.1-201ENST00000434352 607 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 B3GNT2P1-201ENST00000434960 952 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 MTND1P30-201ENST00000441241 901 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.69□□□□□ -1.66
COL3A1P02461 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.69□□□□□ -1.66
COL3A1P02461 EEF1E1P1-201ENST00000446998 430 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 RAB28P3-201ENST00000448325 597 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 CCRL1P1-201ENST00000449542 1053 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.69□□□□□ -1.66
COL3A1P02461 AC025518.1-201ENST00000479856 347 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 HMGB1P36-201ENST00000487709 576 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC074344.1-201ENST00000512823 224 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.69□□□□□ -1.66
COL3A1P02461 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.69□□□□□ -1.66
COL3A1P02461 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.69□□□□□ -1.66
COL3A1P02461 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.69□□□□□ -1.66
COL3A1P02461 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.69□□□□□ -1.66
COL3A1P02461 ZNF519P2-201ENST00000557032 169 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.69□□□□□ -1.66
COL3A1P02461 ROCK1P1-201ENST00000573767 549 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.69□□□□□ -1.66
COL3A1P02461 AC010591.1-201ENST00000603941 649 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC005034.5-201ENST00000604219 466 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 SUMO2P14-201ENST00000604488 293 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC090186.1-201ENST00000605991 572 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AL139418.1-201ENST00000613613 177 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AP003355.3-201ENST00000623465 114 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AL732372.2-225ENST00000642124 456 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.69□□□□□ -1.66
COL3A1P02461 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.69□□□□□ -1.66
COL3A1P02461 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.69□□□□□ -1.66
COL3A1P02461 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.69□□□□□ -1.66
COL3A1P02461 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL3A1P02461 SNORA40.2-201ENST00000390847 128 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.69□□□□□ -1.66
COL3A1P02461 RPS24P12-201ENST00000402084 394 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 RN7SKP111-201ENST00000410349 271 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 RPL7P8-201ENST00000411964 730 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.69□□□□□ -1.66
COL3A1P02461 Z99497.1-201ENST00000421282 135 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.69□□□□□ -1.66
COL3A1P02461 ETF1P3-201ENST00000430422 1160 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 USP9YP29-201ENST00000445112 563 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 RPS29P31-201ENST00000446147 164 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.69□□□□□ -1.66
COL3A1P02461 FDX1P2-201ENST00000450769 375 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.69□□□□□ -1.66
COL3A1P02461 AC116337.2-201ENST00000477662 156 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 OR5H5P-201ENST00000503164 928 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.69□□□□□ -1.66
COL3A1P02461 MTCO3P15-201ENST00000526563 574 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AP001646.1-201ENST00000527936 915 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.69□□□□□ -1.66
COL3A1P02461 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.69□□□□□ -1.66
COL3A1P02461 AC012254.4-201ENST00000588843 273 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC006116.10-201ENST00000591836 581 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC092954.2-201ENST00000609103 430 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AL355365.1-201ENST00000616480 294 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC007342.8-201ENST00000623278 678 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC073869.7-201ENST00000640874 297 ntBASIC4.69□□□□□ -1.66
COL3A1P02461 AC011477.1-204ENST00000623416 1325 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 MTND5P17-201ENST00000418405 1603 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 FAM35DP-201ENST00000323387 2712 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 AC073346.2-201ENST00000624724 2058 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL3A1P02461 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.68□□□□□ -1.66
COL3A1P02461 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
COL3A1P02461 DNAJC19P6-201ENST00000401853 280 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 OR51A5P-201ENST00000415429 942 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 AC104651.1-201ENST00000427559 735 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 AC005189.1-201ENST00000431286 310 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 TMX2P1-201ENST00000436507 708 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.68□□□□□ -1.66
COL3A1P02461 SKP1P1-201ENST00000438081 489 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 AC004924.1-201ENST00000480160 781 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms