Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC080078.2-201ENST00000603766 501 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AL034351.1-201ENST00000605288 668 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.74□□□□□ -1.81
COL2A1P02458 AL096803.3-201ENST00000609032 532 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AC093673.2-201ENST00000609674 331 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AL355073.2-201ENST00000612106 557 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AC116165.2-201ENST00000616705 206 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AC123767.1-202ENST00000620407 817 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AL157770.1-201ENST00000623049 439 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 AC139713.2-210ENST00000641741 992 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL2A1P02458 AC007390.2-201ENST00000606229 3803 ntBASIC3.74□□□□□ -1.81
COL2A1P02458 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL2A1P02458 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL2A1P02458 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL2A1P02458 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.74□□□□□ -1.81
COL2A1P02458 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL2A1P02458 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
COL2A1P02458 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
COL2A1P02458 RNU4-68P-201ENST00000364314 141 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 RNU6-796P-201ENST00000391086 107 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.73□□□□□ -1.81
COL2A1P02458 AF274854.1-201ENST00000413236 615 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.73□□□□□ -1.81
COL2A1P02458 DEFB130D-201ENST00000426866 237 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.73□□□□□ -1.81
COL2A1P02458 AL358794.1-201ENST00000445689 381 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 THAP12P8-201ENST00000447914 2115 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.73□□□□□ -1.81
COL2A1P02458 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 MTND3P7-201ENST00000474435 343 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.73□□□□□ -1.81
COL2A1P02458 AC111000.2-201ENST00000507775 550 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 SEC11B-201ENST00000518383 499 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL2A1P02458 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.73□□□□□ -1.81
COL2A1P02458 AP003461.1-201ENST00000528866 78 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC008015.1-201ENST00000555505 465 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.73□□□□□ -1.81
COL2A1P02458 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.73□□□□□ -1.81
COL2A1P02458 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL2A1P02458 AC091931.1-201ENST00000623488 728 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC007671.2-201ENST00000637344 619 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
COL2A1P02458 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
COL2A1P02458 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
COL2A1P02458 AC116158.1-201ENST00000560231 2129 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC073325.2-201ENST00000339545 159 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 RNU6-249P-201ENST00000363016 102 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 RNU6-623P-201ENST00000363143 105 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 RNU6-636P-201ENST00000384598 107 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC119751.3-201ENST00000399720 670 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.73□□□□□ -1.81
COL2A1P02458 AC002524.1-201ENST00000411687 547 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 TRGV6-201ENST00000417928 299 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.73□□□□□ -1.81
COL2A1P02458 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.73□□□□□ -1.81
COL2A1P02458 RPS7P2-201ENST00000435134 607 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.73□□□□□ -1.81
COL2A1P02458 CST9LP2-201ENST00000437612 320 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC068135.1-201ENST00000446164 246 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AP000936.2-201ENST00000447151 681 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.73□□□□□ -1.81
COL2A1P02458 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
COL2A1P02458 ANKRD26P4-201ENST00000455755 950 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC068724.1-201ENST00000487100 792 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.73□□□□□ -1.81
COL2A1P02458 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.73□□□□□ -1.81
COL2A1P02458 MIR2276-201ENST00000516886 89 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.73□□□□□ -1.81
COL2A1P02458 MTND2P26-201ENST00000528255 1029 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.73□□□□□ -1.81
COL2A1P02458 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COL2A1P02458 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.73□□□□□ -1.81
COL2A1P02458 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.73□□□□□ -1.81
COL2A1P02458 AC023813.2-201ENST00000564321 469 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.73□□□□□ -1.81
COL2A1P02458 AL360219.1-201ENST00000610230 366 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC104073.3-201ENST00000610942 955 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
COL2A1P02458 AC067852.7-201ENST00000623270 535 ntBASIC3.73□□□□□ -1.81
COL2A1P02458 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COL2A1P02458 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.73□□□□□ -1.81
COL2A1P02458 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.72□□□□□ -1.81
COL2A1P02458 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.72□□□□□ -1.81
COL2A1P02458 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.72□□□□□ -1.81
COL2A1P02458 AC104454.1-201ENST00000421341 1401 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COL2A1P02458 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.72□□□□□ -1.81
COL2A1P02458 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
COL2A1P02458 Y_RNA.194-201ENST00000363985 102 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 Y_RNA.201-201ENST00000364052 96 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 RNU6-468P-201ENST00000384003 109 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 Y_RNA.472-201ENST00000384322 102 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 AL021407.1-201ENST00000404531 386 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 RN7SKP220-201ENST00000410611 288 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 RNU4-72P-201ENST00000410754 173 ntBASIC3.72□□□□□ -1.81
COL2A1P02458 RNU6-55P-201ENST00000411092 107 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms