Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 RNU1-89P-201ENST00000384592 164 ntBASIC4.42□□□□□ -1.7
DDX58O95786 AC016769.3-201ENST00000396562 315 ntBASIC4.42□□□□□ -1.7
DDX58O95786 AL592310.1-201ENST00000414330 671 ntBASIC4.42□□□□□ -1.7
DDX58O95786 AL356320.2-201ENST00000417263 507 ntBASIC4.42□□□□□ -1.7
DDX58O95786 AC244098.2-201ENST00000422068 99 ntBASIC4.42□□□□□ -1.7
DDX58O95786 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX58O95786 USP9YP31-201ENST00000431405 881 ntBASIC4.42□□□□□ -1.7
DDX58O95786 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX58O95786 AC005019.1-201ENST00000436455 431 ntBASIC4.42□□□□□ -1.7
DDX58O95786 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX58O95786 SKP1P1-201ENST00000438081 489 ntBASIC4.42□□□□□ -1.7
DDX58O95786 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.42□□□□□ -1.7
DDX58O95786 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDX58O95786 PTENP1-201ENST00000447117 1215 ntBASIC4.42□□□□□ -1.7
DDX58O95786 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX58O95786 RPS20P24-201ENST00000457473 361 ntBASIC4.42□□□□□ -1.7
DDX58O95786 AC084357.1-201ENST00000473404 255 ntBASIC4.42□□□□□ -1.7
DDX58O95786 RPL32P34-201ENST00000486380 400 ntBASIC4.42□□□□□ -1.7
DDX58O95786 AL358832.1-201ENST00000497800 389 ntBASIC4.42□□□□□ -1.7
DDX58O95786 OR5H5P-201ENST00000503164 928 ntBASIC4.42□□□□□ -1.7
DDX58O95786 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
DDX58O95786 RNU6-311P-201ENST00000516224 102 ntBASIC4.42□□□□□ -1.7
DDX58O95786 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
DDX58O95786 AC011611.1-201ENST00000552179 197 ntBASIC4.42□□□□□ -1.7
DDX58O95786 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.42□□□□□ -1.7
DDX58O95786 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX58O95786 BNIP3P26-201ENST00000600827 554 ntBASIC4.42□□□□□ -1.7
DDX58O95786 AL139286.1-201ENST00000604465 483 ntBASIC4.42□□□□□ -1.7
DDX58O95786 AL713922.2-201ENST00000619384 716 ntBASIC4.42□□□□□ -1.7
DDX58O95786 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX58O95786 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX58O95786 AC109315.1-201ENST00000584143 1347 ntBASIC4.42□□□□□ -1.7
DDX58O95786 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX58O95786 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX58O95786 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.42□□□□□ -1.7
DDX58O95786 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX58O95786 MTND5P1-201ENST00000445440 1375 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX58O95786 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
DDX58O95786 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX58O95786 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX58O95786 XIAPP3-201ENST00000312918 795 ntBASIC4.41□□□□□ -1.7
DDX58O95786 RNVU1-14-201ENST00000384770 164 ntBASIC4.41□□□□□ -1.7
DDX58O95786 MIR506-201ENST00000384998 124 ntBASIC4.41□□□□□ -1.7
DDX58O95786 PTMAP5-201ENST00000393073 333 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AL590084.1-201ENST00000407885 387 ntBASIC4.41□□□□□ -1.7
DDX58O95786 RNA5SP56-201ENST00000410277 118 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX58O95786 LUZP4P1-201ENST00000415420 344 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX58O95786 AC092427.1-201ENST00000439177 601 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX58O95786 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX58O95786 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX58O95786 RPL5P24-201ENST00000463742 885 ntBASIC4.41□□□□□ -1.7
DDX58O95786 PABPC1P3-201ENST00000469174 459 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC011979.1-201ENST00000472300 483 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.41□□□□□ -1.7
DDX58O95786 AC078817.1-201ENST00000492623 435 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX58O95786 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.41□□□□□ -1.7
DDX58O95786 RNU2-58P-201ENST00000516403 183 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX58O95786 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.41□□□□□ -1.7
DDX58O95786 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX58O95786 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX58O95786 AL139174.1-201ENST00000531489 886 ntBASIC4.41□□□□□ -1.7
DDX58O95786 MTND1P24-201ENST00000552175 861 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX58O95786 AL389895.1-201ENST00000554127 252 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AL132657.2-201ENST00000564417 358 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX58O95786 AC010928.3-201ENST00000587712 541 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.41□□□□□ -1.7
DDX58O95786 AC006557.5-201ENST00000603126 811 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC012468.1-201ENST00000604888 430 ntBASIC4.41□□□□□ -1.7
DDX58O95786 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC026790.2-201ENST00000606282 430 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX58O95786 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX58O95786 AC004825.2-201ENST00000616634 455 ntBASIC4.41□□□□□ -1.7
DDX58O95786 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC006386.1-201ENST00000619436 415 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC013470.4-201ENST00000619978 986 ntBASIC4.41□□□□□ -1.7
DDX58O95786 AC073348.1-201ENST00000623002 331 ntBASIC4.41□□□□□ -1.7
DDX58O95786 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.41□□□□□ -1.7
DDX58O95786 CYP3A51P-201ENST00000633513 256 ntBASIC4.41□□□□□ -1.7
DDX58O95786 MTND2P41-201ENST00000637599 773 ntBASIC4.41□□□□□ -1.7
DDX58O95786 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DDX58O95786 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDX58O95786 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DDX58O95786 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
DDX58O95786 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DDX58O95786 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DDX58O95786 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
DDX58O95786 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
DDX58O95786 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
DDX58O95786 RNU6-283P-201ENST00000364788 107 ntBASIC4.4□□□□□ -1.71
DDX58O95786 RNA5SP267-201ENST00000364893 126 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms