Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 NPM1P52-201ENST00000518264 846 ntBASIC2□□□□□ -2.09
SIX6O95475 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
SIX6O95475 AKIRIN1P1-201ENST00000547384 544 ntBASIC2□□□□□ -2.09
SIX6O95475 AC079600.2-201ENST00000550076 130 ntBASIC2□□□□□ -2.09
SIX6O95475 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2□□□□□ -2.09
SIX6O95475 MIR4443-201ENST00000585052 53 ntBASIC2□□□□□ -2.09
SIX6O95475 SNRPGP15-201ENST00000600149 222 ntBASIC2□□□□□ -2.09
SIX6O95475 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2□□□□□ -2.09
SIX6O95475 AC069304.3-201ENST00000603938 1084 ntBASIC2□□□□□ -2.09
SIX6O95475 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2□□□□□ -2.09
SIX6O95475 AC006329.2-201ENST00000611491 394 ntBASIC2□□□□□ -2.09
SIX6O95475 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2□□□□□ -2.09
SIX6O95475 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2□□□□□ -2.09
SIX6O95475 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2□□□□□ -2.09
SIX6O95475 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2□□□□□ -2.09
SIX6O95475 AL356863.1-201ENST00000623378 1080 ntBASIC2□□□□□ -2.09
SIX6O95475 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2□□□□□ -2.09
SIX6O95475 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
SIX6O95475 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2□□□□□ -2.09
SIX6O95475 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SIX6O95475 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2□□□□□ -2.09
SIX6O95475 AC233263.6-201ENST00000631132 1963 ntBASIC1.99□□□□□ -2.09
SIX6O95475 SAGE4P-201ENST00000442271 3381 ntBASIC1.99□□□□□ -2.09
SIX6O95475 AP000526.1-201ENST00000603308 1388 ntBASIC1.99□□□□□ -2.09
SIX6O95475 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SIX6O95475 AC116096.1-201ENST00000566804 2314 ntBASIC1.99□□□□□ -2.09
SIX6O95475 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SIX6O95475 AC240504.1-201ENST00000395709 845 ntBASIC1.99□□□□□ -2.09
SIX6O95475 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.99□□□□□ -2.09
SIX6O95475 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.99□□□□□ -2.09
SIX6O95475 DPPA3P1-201ENST00000448050 469 ntBASIC1.99□□□□□ -2.09
SIX6O95475 AC011753.1-201ENST00000451001 220 ntBASIC1.99□□□□□ -2.09
SIX6O95475 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.99□□□□□ -2.09
SIX6O95475 TRBV26-201ENST00000456572 344 ntBASIC1.99□□□□□ -2.09
SIX6O95475 RNU7-27P-201ENST00000459281 62 ntBASIC1.99□□□□□ -2.09
SIX6O95475 AC020898.1-201ENST00000474167 787 ntBASIC1.99□□□□□ -2.09
SIX6O95475 AC010374.2-201ENST00000512933 535 ntBASIC1.99□□□□□ -2.09
SIX6O95475 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.99□□□□□ -2.09
SIX6O95475 RN7SKP40-201ENST00000517211 242 ntBASIC1.99□□□□□ -2.09
SIX6O95475 MTCYBP41-201ENST00000528913 1123 ntBASIC1.99□□□□□ -2.09
SIX6O95475 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.99□□□□□ -2.09
SIX6O95475 BDH2P1-201ENST00000602288 736 ntBASIC1.99□□□□□ -2.09
SIX6O95475 AL161756.2-201ENST00000604597 246 ntBASIC1.99□□□□□ -2.09
SIX6O95475 CR392039.4-201ENST00000624968 501 ntBASIC1.99□□□□□ -2.09
SIX6O95475 U6.105-201ENST00000637379 88 ntBASIC1.99□□□□□ -2.09
SIX6O95475 PABPC1P7-201ENST00000413177 1513 ntBASIC1.99□□□□□ -2.09
SIX6O95475 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.99□□□□□ -2.09
SIX6O95475 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SIX6O95475 AL359693.1-201ENST00000614959 2407 ntBASIC1.98□□□□□ -2.09
SIX6O95475 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.98□□□□□ -2.09
SIX6O95475 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SIX6O95475 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SIX6O95475 Z75741.2-201ENST00000417272 1167 ntBASIC1.98□□□□□ -2.09
SIX6O95475 SRIP2-201ENST00000428470 166 ntBASIC1.98□□□□□ -2.09
SIX6O95475 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SIX6O95475 AC087499.2-201ENST00000432861 149 ntBASIC1.98□□□□□ -2.09
SIX6O95475 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.98□□□□□ -2.09
SIX6O95475 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.98□□□□□ -2.09
SIX6O95475 HMGB1P5-202ENST00000451497 985 ntBASIC1.98□□□□□ -2.09
SIX6O95475 AC104472.2-201ENST00000469035 601 ntBASIC1.98□□□□□ -2.09
SIX6O95475 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.98□□□□□ -2.09
SIX6O95475 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.98□□□□□ -2.09
SIX6O95475 AC008716.1-201ENST00000511084 513 ntBASIC1.98□□□□□ -2.09
SIX6O95475 AC010306.1-201ENST00000523223 1117 ntBASIC1.98□□□□□ -2.09
SIX6O95475 SUB1P1-201ENST00000524415 382 ntBASIC1.98□□□□□ -2.09
SIX6O95475 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.98□□□□□ -2.09
SIX6O95475 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.98□□□□□ -2.09
SIX6O95475 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.98□□□□□ -2.09
SIX6O95475 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.98□□□□□ -2.09
SIX6O95475 CSNK1A1P1-202ENST00000563423 981 ntBASIC1.98□□□□□ -2.09
SIX6O95475 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.98□□□□□ -2.09
SIX6O95475 AC103810.1-201ENST00000579873 453 ntBASIC1.98□□□□□ -2.09
SIX6O95475 AC090616.5-202ENST00000582111 297 ntBASIC1.98□□□□□ -2.09
SIX6O95475 MIR6840-201ENST00000611937 71 ntBASIC1.98□□□□□ -2.09
SIX6O95475 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.98□□□□□ -2.09
SIX6O95475 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.98□□□□□ -2.09
SIX6O95475 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SIX6O95475 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SIX6O95475 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
SIX6O95475 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.98□□□□□ -2.09
SIX6O95475 AC010733.2-201ENST00000589496 5702 ntBASIC1.98□□□□□ -2.09
SIX6O95475 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
SIX6O95475 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SIX6O95475 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SIX6O95475 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
SIX6O95475 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SIX6O95475 MIR422A-201ENST00000362286 90 ntBASIC1.97□□□□□ -2.09
SIX6O95475 RNU6-532P-201ENST00000384318 107 ntBASIC1.97□□□□□ -2.09
SIX6O95475 MIR183-201ENST00000384958 110 ntBASIC1.97□□□□□ -2.09
SIX6O95475 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.97□□□□□ -2.09
SIX6O95475 AC244098.2-201ENST00000422068 99 ntBASIC1.97□□□□□ -2.09
SIX6O95475 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.97□□□□□ -2.09
SIX6O95475 RPL23AP33-201ENST00000442301 452 ntBASIC1.97□□□□□ -2.09
SIX6O95475 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SIX6O95475 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.97□□□□□ -2.09
SIX6O95475 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.97□□□□□ -2.09
SIX6O95475 AC090255.1-201ENST00000495779 349 ntBASIC1.97□□□□□ -2.09
SIX6O95475 ACTR3BP4-201ENST00000503033 1244 ntBASIC1.97□□□□□ -2.09
SIX6O95475 HIGD1AP13-201ENST00000509878 289 ntBASIC1.97□□□□□ -2.09
SIX6O95475 AL121603.1-201ENST00000553815 142 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms