Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN3O95197 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.19□□□□□ -1.74
RTN3O95197 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RTN3O95197 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.19□□□□□ -1.74
RTN3O95197 SNORA4.1-201ENST00000364263 144 ntBASIC4.19□□□□□ -1.74
RTN3O95197 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN3O95197 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN3O95197 AL138880.1-201ENST00000405824 642 ntBASIC4.19□□□□□ -1.74
RTN3O95197 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.19□□□□□ -1.74
RTN3O95197 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.19□□□□□ -1.74
RTN3O95197 MTCO2P5-201ENST00000422621 426 ntBASIC4.19□□□□□ -1.74
RTN3O95197 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RTN3O95197 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.19□□□□□ -1.74
RTN3O95197 TBCAP1-201ENST00000436520 327 ntBASIC4.19□□□□□ -1.74
RTN3O95197 AL359073.1-201ENST00000448036 403 ntBASIC4.19□□□□□ -1.74
RTN3O95197 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.19□□□□□ -1.74
RTN3O95197 RNU7-136P-201ENST00000458819 69 ntBASIC4.19□□□□□ -1.74
RTN3O95197 FAM172BP-201ENST00000487497 1089 ntBASIC4.19□□□□□ -1.74
RTN3O95197 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.19□□□□□ -1.74
RTN3O95197 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.19□□□□□ -1.74
RTN3O95197 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.19□□□□□ -1.74
RTN3O95197 NPM1P41-201ENST00000512920 831 ntBASIC4.19□□□□□ -1.74
RTN3O95197 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.19□□□□□ -1.74
RTN3O95197 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
RTN3O95197 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.19□□□□□ -1.74
RTN3O95197 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.19□□□□□ -1.74
RTN3O95197 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.19□□□□□ -1.74
RTN3O95197 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.19□□□□□ -1.74
RTN3O95197 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.19□□□□□ -1.74
RTN3O95197 AC022968.1-201ENST00000567372 442 ntBASIC4.19□□□□□ -1.74
RTN3O95197 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.19□□□□□ -1.74
RTN3O95197 AL451086.1-201ENST00000605596 223 ntBASIC4.19□□□□□ -1.74
RTN3O95197 AC011816.2-201ENST00000607089 556 ntBASIC4.19□□□□□ -1.74
RTN3O95197 MIR92B-201ENST00000607575 96 ntBASIC4.19□□□□□ -1.74
RTN3O95197 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
RTN3O95197 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.19□□□□□ -1.74
RTN3O95197 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.19□□□□□ -1.74
RTN3O95197 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN3O95197 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN3O95197 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RTN3O95197 AL049780.3-201ENST00000624612 1583 ntBASIC4.19□□□□□ -1.74
RTN3O95197 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.18□□□□□ -1.74
RTN3O95197 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.18□□□□□ -1.74
RTN3O95197 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RTN3O95197 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.18□□□□□ -1.74
RTN3O95197 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTN3O95197 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTN3O95197 SNORA31-201ENST00000362607 130 ntBASIC4.18□□□□□ -1.74
RTN3O95197 RNU6-931P-201ENST00000363850 107 ntBASIC4.18□□□□□ -1.74
RTN3O95197 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.18□□□□□ -1.74
RTN3O95197 RNU6-213P-201ENST00000384051 104 ntBASIC4.18□□□□□ -1.74
RTN3O95197 TAS2R15P-201ENST00000390674 928 ntBASIC4.18□□□□□ -1.74
RTN3O95197 AL031679.1-201ENST00000400616 525 ntBASIC4.18□□□□□ -1.74
RTN3O95197 SNORA3C-201ENST00000408792 125 ntBASIC4.18□□□□□ -1.74
RTN3O95197 TPMTP2-201ENST00000414372 726 ntBASIC4.18□□□□□ -1.74
RTN3O95197 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.18□□□□□ -1.74
RTN3O95197 AL590233.1-201ENST00000430017 456 ntBASIC4.18□□□□□ -1.74
RTN3O95197 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.18□□□□□ -1.74
RTN3O95197 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.18□□□□□ -1.74
RTN3O95197 Z95327.1-201ENST00000446082 482 ntBASIC4.18□□□□□ -1.74
RTN3O95197 BTF3P5-201ENST00000457252 467 ntBASIC4.18□□□□□ -1.74
RTN3O95197 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.18□□□□□ -1.74
RTN3O95197 RPS4XP15-201ENST00000489210 795 ntBASIC4.18□□□□□ -1.74
RTN3O95197 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.18□□□□□ -1.74
RTN3O95197 NDUFB4P9-201ENST00000511646 388 ntBASIC4.18□□□□□ -1.74
RTN3O95197 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.18□□□□□ -1.74
RTN3O95197 MTND4LP31-201ENST00000514859 294 ntBASIC4.18□□□□□ -1.74
RTN3O95197 RNA5SP179-201ENST00000517284 121 ntBASIC4.18□□□□□ -1.74
RTN3O95197 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.18□□□□□ -1.74
RTN3O95197 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.18□□□□□ -1.74
RTN3O95197 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.18□□□□□ -1.74
RTN3O95197 AC007599.1-201ENST00000568688 1174 ntBASIC4.18□□□□□ -1.74
RTN3O95197 AC012182.1-201ENST00000570133 895 ntBASIC4.18□□□□□ -1.74
RTN3O95197 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.18□□□□□ -1.74
RTN3O95197 AC091167.4-201ENST00000605079 184 ntBASIC4.18□□□□□ -1.74
RTN3O95197 AC007490.1-201ENST00000624321 703 ntBASIC4.18□□□□□ -1.74
RTN3O95197 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.18□□□□□ -1.74
RTN3O95197 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
RTN3O95197 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTN3O95197 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RTN3O95197 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.18□□□□□ -1.74
RTN3O95197 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.18□□□□□ -1.74
RTN3O95197 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.18□□□□□ -1.74
RTN3O95197 AP002001.2-201ENST00000529025 1469 ntBASIC4.18□□□□□ -1.74
RTN3O95197 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
RTN3O95197 AL365440.1-201ENST00000436135 2167 ntBASIC4.17□□□□□ -1.74
RTN3O95197 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.17□□□□□ -1.74
RTN3O95197 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
RTN3O95197 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
RTN3O95197 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.17□□□□□ -1.74
RTN3O95197 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RTN3O95197 RNA5SP399-201ENST00000364003 117 ntBASIC4.17□□□□□ -1.74
RTN3O95197 RNA5SP97-201ENST00000365006 84 ntBASIC4.17□□□□□ -1.74
RTN3O95197 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
RTN3O95197 RNU6-629P-201ENST00000384061 103 ntBASIC4.17□□□□□ -1.74
RTN3O95197 MIR607-201ENST00000385241 96 ntBASIC4.17□□□□□ -1.74
RTN3O95197 AC025750.1-201ENST00000399891 379 ntBASIC4.17□□□□□ -1.74
RTN3O95197 RNU6-712P-201ENST00000410558 100 ntBASIC4.17□□□□□ -1.74
RTN3O95197 RPL7AP73-201ENST00000413490 353 ntBASIC4.17□□□□□ -1.74
RTN3O95197 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms