Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM3O75382 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM3O75382 AL355578.1-201ENST00000607405 1328 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 HMGB1P5-201ENST00000255320 642 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 ANKRD36P1-201ENST00000344424 659 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 SNORD9-201ENST00000362566 104 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 MIR620-201ENST00000385232 95 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AL354719.1-201ENST00000406535 843 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 RNA5SP31-201ENST00000411144 127 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC109780.2-201ENST00000413467 845 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 MTND4P3-201ENST00000417829 541 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 BOLA3P4-201ENST00000418151 400 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 HSFY1P1-201ENST00000423928 1178 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM3O75382 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM3O75382 Z93242.1-201ENST00000427102 353 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM3O75382 CYCSP4-201ENST00000429682 331 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM3O75382 BX679664.1-201ENST00000434429 253 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM3O75382 HSPD1P21-201ENST00000436541 245 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 RPL23AP22-201ENST00000437556 453 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM3O75382 RPL17P49-201ENST00000443728 411 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 MTCYBP42-201ENST00000444653 1130 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 PDSS1P2-201ENST00000449397 678 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.31□□□□□ -1.88
TRIM3O75382 AC104073.1-201ENST00000451988 151 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC073387.1-201ENST00000453261 709 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 CAB39P1-201ENST00000502277 460 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC084024.2-201ENST00000503480 791 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC021146.5-201ENST00000503544 545 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC004062.1-201ENST00000509926 645 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 MTCYBP37-201ENST00000510642 1133 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 RNU1-61P-201ENST00000516107 151 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 RNA5SP468-201ENST00000516782 93 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM3O75382 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.31□□□□□ -1.88
TRIM3O75382 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.31□□□□□ -1.88
TRIM3O75382 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM3O75382 AL845331.3-202ENST00000562856 261 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC093519.1-201ENST00000566109 298 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC053481.3-201ENST00000577881 843 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 MIR5708-201ENST00000579723 85 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC096947.1-201ENST00000603233 470 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC008739.3-201ENST00000603262 127 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC010591.1-201ENST00000603941 649 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AL592148.2-201ENST00000612210 372 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AL732618.1-201ENST00000623251 301 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 AC103798.2-201ENST00000624292 632 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM3O75382 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.31□□□□□ -1.88
TRIM3O75382 AC116096.1-201ENST00000566804 2314 ntBASIC3.31□□□□□ -1.88
TRIM3O75382 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM3O75382 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
TRIM3O75382 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.31□□□□□ -1.88
TRIM3O75382 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM3O75382 AC007823.1-201ENST00000569932 1566 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 ZNF734P-201ENST00000419494 1534 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 AC007496.3-201ENST00000624987 3443 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
TRIM3O75382 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM3O75382 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM3O75382 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRIM3O75382 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM3O75382 RNA5SP119-201ENST00000362715 117 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 RNU1-101P-201ENST00000391171 127 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM3O75382 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM3O75382 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM3O75382 AL449283.1-202ENST00000418249 604 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM3O75382 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM3O75382 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM3O75382 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
TRIM3O75382 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM3O75382 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.3□□□□□ -1.88
TRIM3O75382 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.3□□□□□ -1.88
TRIM3O75382 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRIM3O75382 AL358232.1-201ENST00000448030 501 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 MTATP6P14-201ENST00000455189 673 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM3O75382 HMGN2P13-201ENST00000476476 274 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRIM3O75382 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM3O75382 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM3O75382 MTCO3P44-201ENST00000510977 541 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.3□□□□□ -1.88
TRIM3O75382 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.3□□□□□ -1.88
TRIM3O75382 OR4A45P-201ENST00000529954 901 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 AP001317.1-201ENST00000531194 960 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 AP003385.6-201ENST00000531603 374 ntBASIC3.3□□□□□ -1.88
TRIM3O75382 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.3□□□□□ -1.88
TRIM3O75382 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.3□□□□□ -1.88
TRIM3O75382 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.3□□□□□ -1.88
TRIM3O75382 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms