Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCD1O75127 MIR4433B-201ENST00000581329 102 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 MIR4715-201ENST00000584117 79 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
PTCD1O75127 AC008737.2-201ENST00000599446 118 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 AC068790.3-201ENST00000602988 553 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 RPL23AP92-201ENST00000603609 255 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 FAM27B-201ENST00000610601 213 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCD1O75127 C2orf27A-204ENST00000623058 969 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 AC090617.10-201ENST00000624308 134 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTCD1O75127 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.33□□□□□ -1.4
PTCD1O75127 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTCD1O75127 MAPK10-263ENST00000641052 4307 ntBASIC6.33□□□□□ -1.4
PTCD1O75127 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTCD1O75127 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PTCD1O75127 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCD1O75127 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCD1O75127 GVINP1-202ENST00000531871 7271 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCD1O75127 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCD1O75127 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCD1O75127 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCD1O75127 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PTCD1O75127 RNU6-97P-201ENST00000363387 104 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 U3.30-201ENST00000391308 210 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 RPL32P23-201ENST00000397237 405 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 RPL7P60-201ENST00000397636 735 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 AL049697.2-201ENST00000403708 294 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCD1O75127 AC137499.1-201ENST00000427602 88 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 AL591212.2-201ENST00000433923 257 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCD1O75127 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCD1O75127 RPL7P52-201ENST00000449200 742 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCD1O75127 AC104073.1-201ENST00000451988 151 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCD1O75127 AC006512.1-201ENST00000468816 291 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCD1O75127 TMEM248P1-201ENST00000510579 951 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCD1O75127 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCD1O75127 SCARNA24.1-201ENST00000516465 137 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 AC107953.1-201ENST00000522216 297 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCD1O75127 PSMA2P1-201ENST00000526365 646 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 ELOCP31-201ENST00000540463 467 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCD1O75127 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCD1O75127 DNAJC8P1-201ENST00000554535 372 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PTCD1O75127 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCD1O75127 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCD1O75127 AC060771.1-201ENST00000582031 164 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCD1O75127 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCD1O75127 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTCD1O75127 AL022401.1-201ENST00000619498 108 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.32□□□□□ -1.4
PTCD1O75127 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCD1O75127 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.32□□□□□ -1.4
PTCD1O75127 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTCD1O75127 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTCD1O75127 AC139713.2-214ENST00000642059 1811 ntBASIC6.32□□□□□ -1.4
PTCD1O75127 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTCD1O75127 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTCD1O75127 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCD1O75127 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCD1O75127 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PTCD1O75127 Y_RNA.133-201ENST00000363428 110 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.31□□□□□ -1.4
PTCD1O75127 Y_RNA.431-201ENST00000384086 102 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PTCD1O75127 RNU6-510P-201ENST00000391239 108 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.31□□□□□ -1.4
PTCD1O75127 TXNP7-201ENST00000406296 293 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 AC092832.1-201ENST00000422934 400 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 MTCO3P46-201ENST00000425787 232 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 AL138799.3-201ENST00000438968 350 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 AL691482.1-201ENST00000453255 87 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 AC009963.2-201ENST00000453431 138 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 AC103987.1-201ENST00000473394 348 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.31□□□□□ -1.4
PTCD1O75127 RNU6-123P-201ENST00000516163 102 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 SUB1P1-201ENST00000524415 382 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 AC087241.2-201ENST00000535801 324 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.31□□□□□ -1.4
PTCD1O75127 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.31□□□□□ -1.4
PTCD1O75127 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.31□□□□□ -1.4
PTCD1O75127 PARP1P2-201ENST00000556806 195 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 MIR4277-201ENST00000578298 84 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCD1O75127 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCD1O75127 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.31□□□□□ -1.4
PTCD1O75127 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTCD1O75127 OR4G1P-203ENST00000641984 1631 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 DHX40P1-201ENST00000588725 1412 ntBASIC6.31□□□□□ -1.4
PTCD1O75127 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms