Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 HSPE1P7-201ENST00000604681 321 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AC016542.1-201ENST00000608259 493 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AC090115.4-201ENST00000609970 188 ntBASIC2.49□□□□□ -2.01
SSNA1O43805 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.49□□□□□ -2.01
SSNA1O43805 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SSNA1O43805 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SSNA1O43805 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.48□□□□□ -2.01
SSNA1O43805 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.48□□□□□ -2.01
SSNA1O43805 RNU6-921P-201ENST00000384361 107 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 SNORA1.3-201ENST00000384676 136 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 SNORD15B-201ENST00000384714 146 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SSNA1O43805 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.48□□□□□ -2.01
SSNA1O43805 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SSNA1O43805 BX842559.1-201ENST00000419615 532 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 RPL7P37-201ENST00000425095 738 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.48□□□□□ -2.01
SSNA1O43805 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.48□□□□□ -2.01
SSNA1O43805 AC004022.1-201ENST00000447766 1066 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.48□□□□□ -2.01
SSNA1O43805 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC2.48□□□□□ -2.01
SSNA1O43805 AC008155.2-201ENST00000464337 397 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC074386.1-201ENST00000476560 767 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 RN7SL132P-201ENST00000478131 296 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC103975.1-201ENST00000482506 483 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 RPL32P34-201ENST00000486380 400 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.48□□□□□ -2.01
SSNA1O43805 SEM1P1-201ENST00000506694 209 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.48□□□□□ -2.01
SSNA1O43805 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSNA1O43805 HIGD1AP6-201ENST00000521833 279 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.48□□□□□ -2.01
SSNA1O43805 TRAV11-201ENST00000539512 339 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC004217.3-201ENST00000551552 878 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.48□□□□□ -2.01
SSNA1O43805 AP005205.1-201ENST00000563503 508 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 FAM60BP-201ENST00000578364 658 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.48□□□□□ -2.01
SSNA1O43805 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.48□□□□□ -2.01
SSNA1O43805 CCDC58P3-201ENST00000590792 430 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.48□□□□□ -2.01
SSNA1O43805 U73023.1-201ENST00000603134 700 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC104785.1-201ENST00000603220 588 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC079880.2-201ENST00000603790 1213 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC106028.5-201ENST00000610332 395 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AL138880.2-201ENST00000616214 239 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC025016.1-201ENST00000616746 682 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC007318.2-201ENST00000620999 243 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC099506.2-201ENST00000623074 221 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC040168.1-201ENST00000623594 991 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 AC090617.9-201ENST00000623751 147 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.48□□□□□ -2.01
SSNA1O43805 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSNA1O43805 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SSNA1O43805 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 MTND5P31-201ENST00000419366 1374 ntBASIC2.48□□□□□ -2.01
SSNA1O43805 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SSNA1O43805 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.47□□□□□ -2.01
SSNA1O43805 RNU1-85P-201ENST00000364127 164 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 RNA5SP283-201ENST00000365604 119 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SSNA1O43805 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
SSNA1O43805 DEFA7P-201ENST00000382676 285 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 MIR512-1-201ENST00000384913 84 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 SNORD67-201ENST00000390833 111 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 AL512633.1-201ENST00000399931 655 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SSNA1O43805 RNU6-628P-201ENST00000410675 107 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 HMGN1P24-201ENST00000412282 298 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 BX682237.1-201ENST00000415016 335 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.47□□□□□ -2.01
SSNA1O43805 AC005189.1-201ENST00000431286 310 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 AC073063.1-201ENST00000434352 607 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.47□□□□□ -2.01
SSNA1O43805 MRPL50P4-201ENST00000446432 475 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 MTND2P19-201ENST00000449129 1012 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SSNA1O43805 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.47□□□□□ -2.01
SSNA1O43805 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.47□□□□□ -2.01
SSNA1O43805 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.47□□□□□ -2.01
SSNA1O43805 AC026979.1-201ENST00000492525 396 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 AC021678.1-201ENST00000505195 936 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.47□□□□□ -2.01
SSNA1O43805 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SSNA1O43805 AP000867.2-201ENST00000532468 320 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.47□□□□□ -2.01
SSNA1O43805 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC2.47□□□□□ -2.01
SSNA1O43805 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.47□□□□□ -2.01
SSNA1O43805 MIR5685-201ENST00000579080 79 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 AC022069.1-201ENST00000582910 658 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.47□□□□□ -2.01
SSNA1O43805 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.47□□□□□ -2.01
SSNA1O43805 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC2.47□□□□□ -2.01
SSNA1O43805 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.47□□□□□ -2.01
SSNA1O43805 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.47□□□□□ -2.01
SSNA1O43805 AL353748.2-201ENST00000622148 471 ntBASIC2.47□□□□□ -2.01
SSNA1O43805 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
SSNA1O43805 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SSNA1O43805 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms