Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 XKRYP4-201ENST00000414395 483 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGN4O00479 RPL7P10-201ENST00000417407 739 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 RPL31P45-201ENST00000419532 356 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGN4O00479 RPL7P46-201ENST00000425129 740 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 TRIM60P18-201ENST00000441518 828 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 RPL7P59-201ENST00000447700 943 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 XKRYP5-201ENST00000449659 483 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 AC104308.1-201ENST00000454621 333 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 RPS26P21-201ENST00000475397 348 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGN4O00479 HMGB3P15-201ENST00000507326 574 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGN4O00479 SNORA31.26-201ENST00000517250 137 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.15□□□□□ -2.07
HMGN4O00479 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGN4O00479 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HMGN4O00479 AC010653.1-201ENST00000571108 881 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 MIR5007-201ENST00000583098 95 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 AC073387.2-201ENST00000604797 784 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 GMCL1P2-201ENST00000605230 823 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 AC090425.2-201ENST00000608818 501 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 AC092184.1-201ENST00000625042 715 ntBASIC2.15□□□□□ -2.07
HMGN4O00479 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.15□□□□□ -2.07
HMGN4O00479 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.14□□□□□ -2.07
HMGN4O00479 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.14□□□□□ -2.07
HMGN4O00479 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HMGN4O00479 RPL21P132-201ENST00000331267 462 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 RNA5SP295-201ENST00000362655 121 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 U3.12-201ENST00000364498 214 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 RPS4XP8-201ENST00000402039 771 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 MTATP6P11-201ENST00000428071 670 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 ATP5F1P1-201ENST00000433775 569 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 AC018634.1-201ENST00000437554 401 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGN4O00479 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.14□□□□□ -2.07
HMGN4O00479 ARPC3P2-201ENST00000457786 533 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGN4O00479 AC023050.1-201ENST00000498198 304 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 AC078918.1-201ENST00000498515 228 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 AC108471.1-201ENST00000513977 287 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 AC109329.2-201ENST00000519658 482 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.14□□□□□ -2.07
HMGN4O00479 AP000889.2-201ENST00000532684 490 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
HMGN4O00479 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGN4O00479 AC022069.1-201ENST00000582910 658 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGN4O00479 AL451074.6-201ENST00000608512 729 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HMGN4O00479 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
HMGN4O00479 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HMGN4O00479 AC007256.1-201ENST00000392253 2765 ntBASIC2.14□□□□□ -2.07
HMGN4O00479 AC097714.1-201ENST00000511272 1647 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
HMGN4O00479 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HMGN4O00479 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.13□□□□□ -2.07
HMGN4O00479 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
HMGN4O00479 AL591416.1-201ENST00000404015 867 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 AC098592.2-201ENST00000413158 265 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 AF274854.1-201ENST00000413236 615 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 ATG3P1-201ENST00000419507 911 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 AC048351.1-201ENST00000420064 602 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 AC009965.2-201ENST00000425328 970 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGN4O00479 RPL34P26-201ENST00000445636 354 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.13□□□□□ -2.07
HMGN4O00479 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.13□□□□□ -2.07
HMGN4O00479 AL109741.2-201ENST00000455561 343 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.13□□□□□ -2.07
HMGN4O00479 AC126389.1-201ENST00000477436 290 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 RN7SL636P-201ENST00000497504 294 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 ACTR6P1-201ENST00000514311 1104 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 RNA5SP24-201ENST00000516478 95 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGN4O00479 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
HMGN4O00479 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGN4O00479 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGN4O00479 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGN4O00479 AL390838.2-201ENST00000602394 274 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 AP003117.2-201ENST00000606010 545 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 AC016877.3-201ENST00000606778 504 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.13□□□□□ -2.07
HMGN4O00479 AC009159.1-201ENST00000618386 642 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 CTSLP2-204ENST00000629029 392 ntBASIC2.13□□□□□ -2.07
HMGN4O00479 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HMGN4O00479 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.13□□□□□ -2.07
HMGN4O00479 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMGN4O00479 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
HMGN4O00479 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGN4O00479 AL049780.3-201ENST00000624612 1583 ntBASIC2.12□□□□□ -2.07
HMGN4O00479 AL365361.1-201ENST00000566942 3481 ntBASIC2.12□□□□□ -2.07
HMGN4O00479 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMGN4O00479 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMGN4O00479 FTLP6-201ENST00000355274 422 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms