Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM1O00151 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.39□□□□□ -1.87
PDLIM1O00151 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.39□□□□□ -1.87
PDLIM1O00151 BOLA3P3-201ENST00000505182 232 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDLIM1O00151 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.39□□□□□ -1.87
PDLIM1O00151 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.39□□□□□ -1.87
PDLIM1O00151 IGKV2D-36-201ENST00000518643 226 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDLIM1O00151 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.39□□□□□ -1.87
PDLIM1O00151 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.39□□□□□ -1.87
PDLIM1O00151 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM1O00151 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.39□□□□□ -1.87
PDLIM1O00151 AC025588.3-201ENST00000604182 274 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 AL513477.2-201ENST00000607858 568 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 AC092954.1-201ENST00000609121 445 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.39□□□□□ -1.87
PDLIM1O00151 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM1O00151 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDLIM1O00151 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.39□□□□□ -1.87
PDLIM1O00151 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDLIM1O00151 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PDLIM1O00151 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PDLIM1O00151 MTND5P19-201ENST00000424872 1794 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PDLIM1O00151 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PDLIM1O00151 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDLIM1O00151 RNU6-251P-201ENST00000363235 104 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 RNU6-374P-201ENST00000364146 108 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 RNU6-335P-201ENST00000364563 113 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.38□□□□□ -1.87
PDLIM1O00151 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PDLIM1O00151 MIR30B-201ENST00000384850 88 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PDLIM1O00151 RN7SKP159-201ENST00000410657 292 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.38□□□□□ -1.87
PDLIM1O00151 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.38□□□□□ -1.87
PDLIM1O00151 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.38□□□□□ -1.87
PDLIM1O00151 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.38□□□□□ -1.87
PDLIM1O00151 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.38□□□□□ -1.87
PDLIM1O00151 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.38□□□□□ -1.87
PDLIM1O00151 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.38□□□□□ -1.87
PDLIM1O00151 RPL7P2-201ENST00000427639 268 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.38□□□□□ -1.87
PDLIM1O00151 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.38□□□□□ -1.87
PDLIM1O00151 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.38□□□□□ -1.87
PDLIM1O00151 AL359073.1-201ENST00000448036 403 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 EXOSC3P1-201ENST00000448649 500 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PDLIM1O00151 AC079776.3-201ENST00000450665 370 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.38□□□□□ -1.87
PDLIM1O00151 AL590639.1-201ENST00000456484 337 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.38□□□□□ -1.87
PDLIM1O00151 MTCO3P2-201ENST00000457365 171 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDLIM1O00151 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.38□□□□□ -1.87
PDLIM1O00151 AP001189.2-201ENST00000527320 189 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 AP000790.1-201ENST00000528891 737 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 MTCYBP41-201ENST00000528913 1123 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.38□□□□□ -1.87
PDLIM1O00151 MTCYBP27-201ENST00000555160 670 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
PDLIM1O00151 AC087499.8-201ENST00000578406 226 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 AC006130.2-201ENST00000586202 326 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 AL020997.2-201ENST00000602607 184 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 AC024933.1-201ENST00000608472 348 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 AC022149.2-201ENST00000621061 203 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.38□□□□□ -1.87
PDLIM1O00151 AL392088.2-201ENST00000637607 285 ntBASIC3.38□□□□□ -1.87
PDLIM1O00151 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.38□□□□□ -1.87
PDLIM1O00151 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDLIM1O00151 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDLIM1O00151 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.38□□□□□ -1.87
PDLIM1O00151 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.37□□□□□ -1.87
PDLIM1O00151 RNU6-1181P-201ENST00000384191 106 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 SNORD65.1-201ENST00000390889 71 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM1O00151 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.37□□□□□ -1.87
PDLIM1O00151 AL138880.1-201ENST00000405824 642 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 RNU2-71P-201ENST00000411395 189 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM1O00151 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.37□□□□□ -1.87
PDLIM1O00151 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.37□□□□□ -1.87
PDLIM1O00151 AC013410.2-201ENST00000422627 201 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.37□□□□□ -1.87
PDLIM1O00151 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
PDLIM1O00151 ISCA1P2-201ENST00000438679 421 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.37□□□□□ -1.87
PDLIM1O00151 RPL23AP16-201ENST00000441715 421 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.37□□□□□ -1.87
PDLIM1O00151 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PDLIM1O00151 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.37□□□□□ -1.87
PDLIM1O00151 RN7SL499P-201ENST00000481141 276 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 AC013828.1-201ENST00000481845 158 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.37□□□□□ -1.87
PDLIM1O00151 RPL21P131-201ENST00000497298 483 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms