Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
TMEM88BA6NKF7 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
TMEM88BA6NKF7 AC006511.3-201ENST00000624929 1783 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 BDP1P-201ENST00000582658 1990 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 TAB3P1-202ENST00000452645 1634 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 RNU5E-6P-201ENST00000365574 115 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 ELOCP19-201ENST00000411919 318 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC005517.2-201ENST00000424673 553 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 KRT8P51-201ENST00000438938 274 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 HMGB3P9-201ENST00000441799 583 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 RPL29P29-201ENST00000448725 423 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 PPP1R2P5-201ENST00000457256 603 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 snoU13.22-201ENST00000459428 104 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 RPL12P20-201ENST00000475538 479 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC026801.2-201ENST00000515352 425 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC093027.1-201ENST00000546698 429 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AL121821.2-201ENST00000556081 394 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 MIR4703-201ENST00000577728 79 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 MIR4742-201ENST00000581069 85 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AP000769.2-201ENST00000602344 396 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AL161729.3-201ENST00000603533 673 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC105254.2-201ENST00000603636 436 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AL133481.2-203ENST00000607558 139 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC126177.8-201ENST00000618339 1015 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 MIR4275-201ENST00000636486 87 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AC244517.1-201ENST00000606030 2086 ntBASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TMEM88BA6NKF7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 ASNSP1-201ENST00000518311 1939 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AL139276.1-201ENST00000311910 1001 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 RNU6-960P-201ENST00000364056 120 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 RNA5SP90-201ENST00000364801 99 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AP003170.5-201ENST00000397185 335 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AL451054.2-201ENST00000420896 202 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AL645937.1-202ENST00000421799 937 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 RPL23AP1-201ENST00000428990 471 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AL359073.1-201ENST00000448036 403 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AURKAPS2-201ENST00000454983 333 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AL445687.2-201ENST00000458156 728 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 SNORA84-201ENST00000459229 133 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 RN7SL432P-201ENST00000484057 298 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 RNU4-49P-201ENST00000516080 140 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 RN7SKP276-201ENST00000516242 268 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 RNU6-1092P-201ENST00000516955 87 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 SUMO2P20-201ENST00000520803 283 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 MTND4P7-201ENST00000523876 130 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AC106785.1-201ENST00000565935 262 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AL022099.1-201ENST00000604551 712 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AP001486.3-201ENST00000615334 372 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 MIR6130-201ENST00000619419 109 ntBASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TMEM88BA6NKF7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms