Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC092851.1-201ENST00000535964 478 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC022080.3-201ENST00000544433 482 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC087897.1-201ENST00000550134 156 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC074029.1-201ENST00000552531 1044 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC106782.4-201ENST00000568264 210 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 BPTFP1-201ENST00000579209 492 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC008507.1-201ENST00000587506 734 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC025946.2-201ENST00000603398 234 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 RPAP2P1-201ENST00000603626 1168 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 BNIP3P11-201ENST00000603878 563 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AP002802.2-201ENST00000605877 235 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AP000238.1-201ENST00000608759 426 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 U7.8-201ENST00000619968 63 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC004808.1-201ENST00000627671 721 ntBASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SMIM28A0A1B0GU29 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 RPL7P26-201ENST00000333817 754 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 RNU6-549P-201ENST00000384433 107 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 SKINT1L-201ENST00000401057 817 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 USP9YP21-201ENST00000420603 432 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 RPP40P1-201ENST00000426762 456 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 MTCYBP15-201ENST00000433123 1127 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 RPL7P59-201ENST00000447700 943 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC140076.1-201ENST00000449897 361 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC008427.1-201ENST00000503102 655 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC011352.3-201ENST00000505162 593 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC109471.1-201ENST00000511631 612 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC010374.2-201ENST00000512933 535 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 H3F3AP1-201ENST00000559984 334 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 HSPE1P14-201ENST00000605812 302 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AP005137.2-201ENST00000609238 400 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC093673.2-201ENST00000609674 331 ntBASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SMIM28A0A1B0GU29 AC010733.2-201ENST00000589496 5702 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 MTCO2P31-201ENST00000402702 684 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 RNA5SP107-201ENST00000411358 122 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 RPS12P18-201ENST00000442381 270 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 BX276092.4-201ENST00000452056 248 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 RPL6P9-201ENST00000466502 859 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 AC104982.1-201ENST00000478775 574 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 RPS4XP22-201ENST00000480755 780 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 HIGD1AP3-201ENST00000515857 278 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 OR4C2P-201ENST00000530855 1064 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 EIF4BP1-201ENST00000554881 351 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 AC122134.1-202ENST00000569111 1201 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 AC090330.1-201ENST00000588646 764 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 AL606834.3-201ENST00000602615 496 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 AC093732.2-201ENST00000607950 274 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 FAM157B-203ENST00000639350 358 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 MTND5P24-201ENST00000438892 1767 ntBASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.29□□□□□ -1.88
SMIM28A0A1B0GU29 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms