Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 RNA5SP111-201ENST00000411386 101 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 TRAPPC2P10-201ENST00000415662 323 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 TRAPPC2P5-201ENST00000426293 308 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 RN7SL72P-201ENST00000460697 269 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AC114982.1-201ENST00000469402 321 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 RN7SL799P-201ENST00000475891 298 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 RN7SL165P-201ENST00000477476 291 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 RN7SL184P-201ENST00000488308 297 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AC008958.1-201ENST00000511047 682 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 RNA5SP34-201ENST00000516887 130 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AC091144.1-201ENST00000519573 138 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AL049872.1-201ENST00000556323 322 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AL133153.1-201ENST00000557756 303 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AC091193.1-201ENST00000604640 448 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AC008962.1-201ENST00000605729 304 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AL591516.1-201ENST00000611326 274 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AC005520.5-201ENST00000613926 164 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AC022034.1-201ENST00000512867 2156 ntBASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 POT1-202ENST00000393329 3950 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CCDC61Q9Y6R9 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC8.09□□□□□ -1.12
CCDC61Q9Y6R9 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 Y_RNA.44-201ENST00000362676 108 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 Y_RNA.272-201ENST00000364696 102 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 RNU6-1329P-201ENST00000365664 107 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 MIR105-2-201ENST00000385083 81 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 AL033519.2-201ENST00000403958 392 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 RPS4XP7-201ENST00000406274 780 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 RPS12P5-201ENST00000423449 371 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 RNU7-138P-201ENST00000459479 64 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 AC009120.1-201ENST00000493458 473 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 RNU6-64P-201ENST00000517119 105 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 MIR4260-201ENST00000583107 67 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 AL161616.1-201ENST00000611867 286 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 AL596275.2-204ENST00000641628 552 ntBASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC61Q9Y6R9 MAPK10-261ENST00000641050 3109 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 RNU6-1325P-201ENST00000364905 105 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 Y_RNA.488-201ENST00000384403 102 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 Y_RNA.586-201ENST00000391146 98 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 AC092162.1-201ENST00000432828 434 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 FABP5P2-201ENST00000439042 408 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 CYCSP51-201ENST00000443545 318 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 AC091180.1-201ENST00000462104 372 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 AL133445.1-201ENST00000467051 452 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 RPL21P103-201ENST00000479921 488 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 OR10G5P-201ENST00000532733 358 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 AC010186.2-204ENST00000537668 439 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 AC034102.8-201ENST00000615146 484 ntBASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 CCT5-215ENST00000625723 135 ntTSL 5 BASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC61Q9Y6R9 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms