Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 FARSBP1-201ENST00000435808 1778 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 RNA5SP258-201ENST00000362750 119 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 RNU6-853P-201ENST00000364306 107 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 RNA5SP87-201ENST00000384155 118 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 MIR585-201ENST00000384887 94 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 MIR93-201ENST00000385024 80 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 GLULP6-201ENST00000399502 913 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AL356421.1-201ENST00000403255 413 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 RPL7P25-201ENST00000404151 721 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 MIR1911-201ENST00000410783 80 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 RPS20P14-201ENST00000412545 360 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 OR51AB1P-201ENST00000429046 620 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 MTCYBP45-201ENST00000435243 565 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 MTATP6P13-201ENST00000438531 667 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC073614.1-201ENST00000438690 650 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 RPL22P17-201ENST00000438729 315 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC114495.1-201ENST00000441274 436 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 NANOGNBP1-201ENST00000448444 480 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 GAPDHP17-201ENST00000449858 1001 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC093392.2-201ENST00000450682 337 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 MTCO3P44-201ENST00000510977 541 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC091133.4-201ENST00000511142 308 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC005798.1-201ENST00000513715 387 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 SNORA18.6-201ENST00000516792 115 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 MTCO2P4-201ENST00000517968 247 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC087481.2-201ENST00000565492 330 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 MIR4700-201ENST00000578311 74 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC098614.4-201ENST00000607601 462 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC020634.1-201ENST00000608701 549 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AL031666.3-201ENST00000609320 1006 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC100827.5-201ENST00000615883 426 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 AC072046.2-201ENST00000618366 268 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHA3Q9Y5H8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC015813.6-201ENST00000624409 5808 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 FRG1BP-201ENST00000278882 761 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 Y_RNA.46-201ENST00000362695 102 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 RNU6-359P-201ENST00000365466 108 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 MIR3065-201ENST00000390137 79 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 U3.29-201ENST00000391296 212 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 RNU2-15P-201ENST00000410692 191 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 RN7SKP106-201ENST00000410832 272 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 RPL37P18-201ENST00000411602 243 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC009961.2-201ENST00000435771 251 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 RPL7P52-201ENST00000449200 742 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC099563.1-201ENST00000456086 418 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AP1S2P1-201ENST00000457344 379 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 snoU13.8-201ENST00000458890 104 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC010326.1-201ENST00000462726 602 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC010469.1-201ENST00000463864 576 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC092324.1-201ENST00000468671 324 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 RPL12P20-201ENST00000475538 479 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC126182.1-201ENST00000478134 357 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC013356.1-201ENST00000489027 564 ntBASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHA3Q9Y5H8 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms