Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
UBE2D4Q9Y2X8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 AL672167.1-206ENST00000356293 943 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 RNVU1-3-201ENST00000364313 161 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 RNU1-112P-201ENST00000364401 164 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 SNORA7.2-201ENST00000364446 145 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 RNU6-761P-201ENST00000384148 107 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 RPLP0P7-201ENST00000416050 667 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 EI24P1-201ENST00000416584 867 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 USP9YP20-201ENST00000419224 558 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 HIGD1AP13-201ENST00000509878 289 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 CKS1BP7-201ENST00000522230 235 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 AC022080.3-201ENST00000544433 482 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 SNORD84-203ENST00000584275 78 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 AC008687.2-201ENST00000597865 520 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 ATP5A1P2-202ENST00000616464 443 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 VN1R7P-201ENST00000619242 903 ntBASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
UBE2D4Q9Y2X8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 CUL4AP1-201ENST00000514750 1863 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AC073055.1-201ENST00000456901 1621 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AL645568.2-201ENST00000432815 1337 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 RNU6-525P-201ENST00000363685 104 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 RNU1-140P-201ENST00000365040 165 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 U8.8-201ENST00000365399 135 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 SNORA70.4-201ENST00000365509 134 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 SNORA18.3-201ENST00000384122 132 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 SNORA80E-201ENST00000384744 137 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 MIR23A-201ENST00000385245 73 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AL356057.2-201ENST00000403318 432 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AL162578.1-201ENST00000406202 378 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AC080125.1-201ENST00000414888 684 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 RPL35AP12-201ENST00000425362 338 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AC087499.2-201ENST00000432861 149 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 HSFY3P-201ENST00000444242 1191 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 RPL23AP55-201ENST00000498163 452 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 RNA5SP282-201ENST00000516355 108 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 SNORA31.21-201ENST00000517180 77 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AC012493.2-201ENST00000595083 291 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 GMCL1P2-201ENST00000605230 823 ntBASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.78□□□□□ -2.12
UBE2D4Q9Y2X8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.78□□□□□ -2.13
UBE2D4Q9Y2X8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 FRG1BP-201ENST00000278882 761 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 MIR144-201ENST00000384886 86 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 UBA52P6-201ENST00000399822 382 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 RPS4XP7-201ENST00000406274 780 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 RNU2-71P-201ENST00000411395 189 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 AL592148.1-201ENST00000413568 445 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 TRGV7-201ENST00000427089 353 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 LSM1P1-201ENST00000438629 273 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 RPS15AP7-201ENST00000439294 405 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 AL671855.1-201ENST00000446875 1203 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 AC008280.2-201ENST00000455473 307 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 NF1P3-201ENST00000457709 450 ntBASIC1.77□□□□□ -2.13
UBE2D4Q9Y2X8 snoU13.22-201ENST00000459428 104 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms