Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 RPL21P12-201ENST00000559810 515 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AC133794.1-201ENST00000602731 914 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AC009948.4-201ENST00000604692 675 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AC009464.1-201ENST00000615731 469 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 AC092184.1-201ENST00000625042 715 ntBASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CLIP2Q9UDT6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 RNU6-1243P-201ENST00000364028 107 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 RNU6-354P-201ENST00000383862 107 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 RNU6-610P-201ENST00000384264 107 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC126124.2-201ENST00000413542 321 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC245291.1-201ENST00000419501 328 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 PAICSP7-201ENST00000419829 962 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 MTCO2P1-201ENST00000424648 477 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 DEFB130D-201ENST00000426866 237 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 RPL23AP82-202ENST00000427528 469 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 BX890604.2-201ENST00000427883 474 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 MTATP6P17-201ENST00000431030 672 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC006028.1-201ENST00000438379 402 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 RAB11AP1-201ENST00000442978 646 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC005002.1-201ENST00000447458 540 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 CDC42P1-201ENST00000456658 548 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 snoU13.24-201ENST00000458998 104 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC092754.2-201ENST00000463506 460 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 CENPBD1P1-201ENST00000464061 469 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 HIGD1AP3-201ENST00000515857 278 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC104027.1-201ENST00000521887 300 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC004217.3-201ENST00000551552 878 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 EIF5A2P1-201ENST00000564027 460 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 MTCYBP28-201ENST00000566728 1132 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC015917.1-201ENST00000579654 510 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC126365.2-201ENST00000580630 379 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AP004247.3-201ENST00000608682 624 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 MIR8057-201ENST00000620957 69 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AC068880.4-201ENST00000623082 495 ntBASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLIP2Q9UDT6 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 CYCSP32-201ENST00000440548 321 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC092473.1-201ENST00000441098 221 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 RPS27P29-201ENST00000463110 252 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 RPL23AP67-201ENST00000465341 474 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC017015.1-201ENST00000477387 286 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC010265.1-201ENST00000513509 211 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 RNU6-416P-201ENST00000516265 103 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 SNORA64.4-201ENST00000516632 81 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC107934.2-201ENST00000518653 310 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC012493.2-201ENST00000595083 291 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 YWHAQP7-201ENST00000603536 658 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AL139022.2-201ENST00000606934 443 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AP005229.2-201ENST00000609980 697 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 AC006927.4-201ENST00000639187 543 ntBASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLIP2Q9UDT6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLIP2Q9UDT6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms