Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 YWHAZP8-201ENST00000436935 731 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC004865.1-201ENST00000442276 1003 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC008280.2-201ENST00000455473 307 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 RPS4XP2-201ENST00000458402 793 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 RPS23P3-201ENST00000470993 430 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC010301.1-201ENST00000473936 355 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC017015.1-201ENST00000477387 286 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC110794.1-201ENST00000505816 425 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC004062.1-201ENST00000509926 645 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC068657.1-201ENST00000520807 306 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 RPL21P12-201ENST00000559810 515 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC015917.1-201ENST00000579654 510 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC012493.2-201ENST00000595083 291 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 BDH2P1-201ENST00000602288 736 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC073657.2-201ENST00000605661 303 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AL110115.1-201ENST00000614396 364 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 RMST_10.1-201ENST00000616309 154 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC092650.2-201ENST00000619984 902 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 AC097460.3-201ENST00000623099 442 ntBASIC3.11□□□□□ -1.91
CTSFQ9UBX1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.11□□□□□ -1.91
CTSFQ9UBX1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 RNU1-75P-201ENST00000347264 129 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 RNA5SP27-201ENST00000363839 119 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 RNU6-374P-201ENST00000364146 108 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 RNU6-481P-201ENST00000384194 107 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 SSXP10-201ENST00000402595 565 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 PTGES3P2-201ENST00000407942 482 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC233728.2-201ENST00000425348 757 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AL512649.1-201ENST00000428997 581 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AL353705.1-201ENST00000433468 480 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 CYCSP32-201ENST00000440548 321 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 TRIM60P18-201ENST00000441518 828 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 ATP5C1P1-201ENST00000441945 895 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC093392.2-201ENST00000450682 337 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC068724.1-201ENST00000487100 792 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC114967.1-201ENST00000504890 259 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 IGKV2D-36-201ENST00000518643 226 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC008507.1-201ENST00000587506 734 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC005776.1-201ENST00000603164 290 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 DPRXP5-201ENST00000604662 539 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC004832.5-201ENST00000608677 401 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AL512506.1-201ENST00000613918 449 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AL356321.1-201ENST00000621360 228 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC006111.3-201ENST00000622137 383 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AP001002.2-201ENST00000625137 386 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 AC091948.2-201ENST00000636510 279 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 MTCO1P18-201ENST00000455518 1419 ntBASIC3.1□□□□□ -1.91
CTSFQ9UBX1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
CTSFQ9UBX1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTSFQ9UBX1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTSFQ9UBX1 RNA5SP374-201ENST00000362939 125 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTSFQ9UBX1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.09□□□□□ -1.91
CTSFQ9UBX1 AL356968.1-201ENST00000416622 474 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 MRPL50P2-201ENST00000416821 482 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSFQ9UBX1 RPL23AP82-202ENST00000427528 469 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 MTATP6P11-201ENST00000428071 670 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 RPL23AP22-201ENST00000437556 453 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 AC006028.1-201ENST00000438379 402 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 DNAJC19P8-201ENST00000452887 259 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 AL445669.2-201ENST00000454425 421 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.09□□□□□ -1.91
CTSFQ9UBX1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 AL136126.1-201ENST00000473603 402 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 AC108860.1-201ENST00000484521 383 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSFQ9UBX1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.09□□□□□ -1.91
CTSFQ9UBX1 AC105914.1-201ENST00000511798 226 ntBASIC3.09□□□□□ -1.91
CTSFQ9UBX1 RNU6-488P-201ENST00000515918 99 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms