Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CNTN3Q9P232 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CNTN3Q9P232 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNTN3Q9P232 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNTN3Q9P232 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
CNTN3Q9P232 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNTN3Q9P232 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNTN3Q9P232 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNTN3Q9P232 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CNTN3Q9P232 Y_RNA.28-201ENST00000362554 111 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 RNU6-1243P-201ENST00000364028 107 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CNTN3Q9P232 RNU6-641P-201ENST00000384006 107 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 RNU4-14P-201ENST00000410858 122 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 AC005517.2-201ENST00000424673 553 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 RAC1P7-201ENST00000445367 377 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 HMGB3P22-202ENST00000451823 572 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 AC104634.1-201ENST00000452720 462 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 SNRPFP3-201ENST00000457792 225 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 AC079804.1-201ENST00000461922 436 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 AC058823.1-201ENST00000485315 474 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 AL139099.1-201ENST00000497398 403 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CNTN3Q9P232 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 AC127381.1-201ENST00000555979 939 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 AC051619.2-201ENST00000559063 397 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 MIR4716-201ENST00000579628 84 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 AL049794.2-201ENST00000616301 365 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CNTN3Q9P232 AL034549.2-201ENST00000618285 3373 ntBASIC5.78□□□□□ -1.48
CNTN3Q9P232 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CNTN3Q9P232 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CNTN3Q9P232 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNTN3Q9P232 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNTN3Q9P232 RNU1-130P-201ENST00000363930 160 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 Y_RNA.401-201ENST00000383965 117 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 RNU6-1029P-201ENST00000384109 107 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 SNORA5.1-201ENST00000384275 131 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 DUTP5-201ENST00000406790 469 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 RPL37P10-201ENST00000412884 288 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC068533.1-201ENST00000418542 415 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC105402.2-201ENST00000438503 358 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 PRPS1P1-201ENST00000445305 876 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AL389915.2-201ENST00000454576 441 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 SNORD121B-201ENST00000458838 81 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 RNU7-66P-201ENST00000459469 62 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 RNU6-1208P-201ENST00000459588 107 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 RPL35AP28-201ENST00000459730 331 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC090602.1-201ENST00000469695 252 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC068305.1-201ENST00000497406 726 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC093303.1-201ENST00000514549 295 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 HMGB1P41-201ENST00000520234 440 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AP001804.3-201ENST00000525146 880 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 DEFB109D-201ENST00000529497 240 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AP000889.2-201ENST00000532684 490 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 OR10G5P-201ENST00000532733 358 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 DNAJC8P1-201ENST00000554535 372 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 MIR4703-201ENST00000577728 79 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 AL031666.3-201ENST00000609320 1006 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC244107.2-201ENST00000611773 76 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AP001486.3-201ENST00000615334 372 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 uc_338.22-201ENST00000622722 187 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC091925.1-201ENST00000623204 462 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 AP000843.1-201ENST00000624880 701 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC135068.12-201ENST00000637370 931 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC121333.1-201ENST00000567488 2709 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms