Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.02□□□□□ -1.93
TREX1Q9NSU2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC046144.1-201ENST00000478559 1853 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 MTND5P11-201ENST00000511037 1812 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 MIR22-201ENST00000362190 85 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 MIR34B-201ENST00000385076 84 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC073264.1-201ENST00000411508 416 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 HMGB3P31-201ENST00000413333 595 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 RPL36P19-201ENST00000430744 301 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AL513175.1-201ENST00000431492 780 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AL358232.1-201ENST00000448030 501 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC008280.2-201ENST00000455473 307 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC117440.1-201ENST00000474107 571 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC006445.1-201ENST00000491925 405 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC118282.1-201ENST00000506408 765 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC008885.2-201ENST00000509506 930 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC104108.1-201ENST00000509930 412 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC119751.1-201ENST00000513357 765 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC016065.2-201ENST00000514530 444 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 RN7SKP282-201ENST00000516824 299 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 RNA5SP380-201ENST00000517190 98 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC008687.2-201ENST00000597865 520 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AL031985.2-201ENST00000600955 480 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AC069200.1-201ENST00000609511 323 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AP001033.2-201ENST00000609701 1003 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 MTND5P19-201ENST00000424872 1794 ntBASIC3.01□□□□□ -1.93
TREX1Q9NSU2 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TREX1Q9NSU2 MTND5P28-201ENST00000438005 1594 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 SAGE4P-201ENST00000442271 3381 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
TREX1Q9NSU2 OR5BR1P-201ENST00000524992 1330 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3□□□□□ -1.93
TREX1Q9NSU2 AL136520.1-201ENST00000600311 1322 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TREX1Q9NSU2 SEC63P2-201ENST00000503863 1939 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 RNU6-1243P-201ENST00000364028 107 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 NPM1P10-201ENST00000398310 865 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 GSTA8P-201ENST00000404253 637 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 RNU6-272P-201ENST00000411028 104 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 AL389915.1-201ENST00000422463 466 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 RPS7P2-201ENST00000435134 607 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 NPM1P13-201ENST00000452663 865 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 RPS24P6-201ENST00000452670 400 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 DNAJC19P8-201ENST00000452887 259 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 TPRKBP1-201ENST00000456243 481 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3□□□□□ -1.93
TREX1Q9NSU2 RPL7P23-201ENST00000493874 747 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3□□□□□ -1.93
TREX1Q9NSU2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3□□□□□ -1.93
TREX1Q9NSU2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3□□□□□ -1.93
TREX1Q9NSU2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3□□□□□ -1.93
TREX1Q9NSU2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3□□□□□ -1.93
TREX1Q9NSU2 AC034268.2-201ENST00000571784 482 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 AC053481.3-201ENST00000577881 843 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 AC012254.4-201ENST00000588843 273 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 AC040174.2-201ENST00000602701 465 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 OR4H6P-202ENST00000603819 340 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 AC079791.1-201ENST00000605356 973 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 MIR92B-201ENST00000607575 96 ntBASIC3□□□□□ -1.93
TREX1Q9NSU2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3□□□□□ -1.93
TREX1Q9NSU2 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3□□□□□ -1.93
TREX1Q9NSU2 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3□□□□□ -1.93
TREX1Q9NSU2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3□□□□□ -1.93
TREX1Q9NSU2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
TREX1Q9NSU2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3□□□□□ -1.93
TREX1Q9NSU2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TREX1Q9NSU2 MTND5P27-201ENST00000428871 1720 ntBASIC2.99□□□□□ -1.93
TREX1Q9NSU2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 RNU6-1339P-201ENST00000363574 91 ntBASIC2.99□□□□□ -1.93
TREX1Q9NSU2 RNU6-837P-201ENST00000391056 108 ntBASIC2.99□□□□□ -1.93
TREX1Q9NSU2 MORF4L1P7-201ENST00000426038 703 ntBASIC2.99□□□□□ -1.93
TREX1Q9NSU2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.99□□□□□ -1.93
TREX1Q9NSU2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 snoU13.24-201ENST00000458998 104 ntBASIC2.99□□□□□ -1.93
TREX1Q9NSU2 RPS3AP43-201ENST00000479743 781 ntBASIC2.99□□□□□ -1.93
TREX1Q9NSU2 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TREX1Q9NSU2 AC008885.1-201ENST00000514930 301 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms