Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC245054.2-201ENST00000415639 319 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 HSPE1P1-201ENST00000421494 318 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC233728.2-201ENST00000425348 757 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 DUTP6-201ENST00000425573 462 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AL512661.1-201ENST00000434586 1253 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC122718.1-201ENST00000439448 744 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC002542.1-201ENST00000440683 193 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AL500527.1-201ENST00000448532 255 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 RPL36AP33-201ENST00000450395 310 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 FAM133DP-201ENST00000464802 691 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC017015.1-201ENST00000477387 286 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC019227.1-201ENST00000526902 510 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 OSBPL9P3-201ENST00000534523 595 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AL109618.2-201ENST00000605527 211 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC068831.7-201ENST00000616954 363 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AL360181.4-201ENST00000621752 134 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC243312.2-201ENST00000623340 601 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC009093.8-201ENST00000641769 292 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 ZNF807-201ENST00000328088 1707 ntBASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.04□□□□□ -1.92
CCNB1IP1Q9NPC3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 RNU6-481P-201ENST00000384194 107 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AL121978.1-201ENST00000402778 359 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AL606495.1-201ENST00000422100 813 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AL035410.1-201ENST00000427409 427 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC127537.2-201ENST00000439258 465 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 HSFY3P-201ENST00000444242 1191 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 CDC27P1-201ENST00000445384 715 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 RPL21P23-201ENST00000446654 460 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 CDC42P1-201ENST00000456658 548 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 VPS26AP1-201ENST00000483197 979 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC096751.1-202ENST00000502691 1067 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 POU5F1P7-201ENST00000508759 541 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 SAP18P1-201ENST00000512058 390 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 RNA5SP385-201ENST00000515947 110 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC026403.1-201ENST00000518938 295 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 OR4H12P-201ENST00000556269 907 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC034105.4-201ENST00000568304 277 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 MTCO3P24-201ENST00000572729 782 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC015917.1-201ENST00000579654 510 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC006116.7-201ENST00000590141 756 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AL671309.1-201ENST00000603750 544 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 U3.45-201ENST00000607547 219 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC039056.2-201ENST00000622261 511 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 FAM35CP-201ENST00000554755 2470 ntBASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.03□□□□□ -1.92
CCNB1IP1Q9NPC3 AL589826.1-201ENST00000340697 249 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 RNU6-712P-201ENST00000410558 100 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 AC092641.1-201ENST00000440229 772 ntBASIC3.02□□□□□ -1.93
CCNB1IP1Q9NPC3 HMGB3P6-201ENST00000444896 598 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms