Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC104472.2-201ENST00000469035 601 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 SNORA31.1-201ENST00000515993 133 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 SNORA31.5-201ENST00000516190 133 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 HMGB1P41-201ENST00000520234 440 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 AC051619.2-201ENST00000559063 397 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 BNIP3P5-201ENST00000562290 498 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 AC095057.3-201ENST00000567102 1157 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 MIR5096-201ENST00000583713 70 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 RMST_10.1-201ENST00000616309 154 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 AC006111.3-201ENST00000622137 383 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 AC040168.1-201ENST00000623594 991 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 BX649567.1-201ENST00000642071 1134 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 AC130650.2-201ENST00000618736 2403 ntBASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.82□□□□□ -1.96
VCX3AQ9NNX9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 RNA5SP51-201ENST00000364750 119 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 DEFA7P-201ENST00000382676 285 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 CD24P4-201ENST00000382840 243 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 RNU6-883P-201ENST00000384597 107 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 RNA5SP310-201ENST00000459084 116 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 PRDX3P4-201ENST00000470828 747 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 RPS17P11-201ENST00000474297 293 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC026412.2-201ENST00000512270 1075 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC137768.1-201ENST00000549998 553 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 PARP1P2-201ENST00000556806 195 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC023575.1-201ENST00000580510 358 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AF230666.2-201ENST00000602328 725 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC073387.2-201ENST00000604797 784 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC091046.2-201ENST00000620775 665 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC022509.4-201ENST00000621404 572 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 AC010338.1-201ENST00000621823 717 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 MTCO1P6-201ENST00000481192 1384 ntBASIC2.81□□□□□ -1.96
VCX3AQ9NNX9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 OR1S2-201ENST00000302592 978 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 RNU6-1074P-201ENST00000383995 104 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 RPS3AP26-201ENST00000398259 784 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AC233981.1-201ENST00000423224 461 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AC092170.1-201ENST00000440211 356 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 ELOCP23-201ENST00000452014 332 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 PLGLA-201ENST00000465668 449 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AC020898.1-201ENST00000474167 787 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 VN1R105P-201ENST00000486595 910 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 OSBPL9P3-201ENST00000534523 595 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AADACP1-206ENST00000561502 1193 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 SNORD39.3-201ENST00000584451 71 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AC012669.1-201ENST00000603209 283 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AC009570.1-201ENST00000609599 745 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 MIR6886-201ENST00000619864 61 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 ZNF271P-202ENST00000465539 1970 ntBASIC2.8□□□□□ -1.96
VCX3AQ9NNX9 AP003122.5-201ENST00000527668 3766 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 AL136520.1-201ENST00000600311 1322 ntBASIC2.79□□□□□ -1.96
VCX3AQ9NNX9 MFSD8-213ENST00000641134 1327 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms