Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 DNAJC19P1-201ENST00000455312 319 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 SUMO2P2-201ENST00000456482 255 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 RPL7P19-201ENST00000469948 618 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AP000797.1-201ENST00000478870 387 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC091167.1-201ENST00000492017 396 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 TMEM251P1-201ENST00000503717 318 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 BNIP3P41-201ENST00000503774 571 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC139783.2-201ENST00000504847 1145 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC093809.1-201ENST00000509155 340 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC026412.2-201ENST00000512270 1075 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 IFITM8P-201ENST00000522529 394 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AP003730.1-201ENST00000524605 285 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 ZNF705CP-201ENST00000530515 889 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 PDCD5P1-201ENST00000543528 309 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 HNRNPCP4-201ENST00000571636 900 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC113403.1-201ENST00000604910 193 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 NDUFA8P1-201ENST00000605525 367 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC090186.1-201ENST00000605991 572 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC064801.1-201ENST00000612025 407 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC024941.1-201ENST00000612250 334 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AL023881.1-201ENST00000621088 301 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 AP000843.1-201ENST00000624880 701 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 U6.101-201ENST00000637707 76 ntBASIC4.39□□□□□ -1.71
USP29Q9HBJ7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.39□□□□□ -1.71
USP29Q9HBJ7 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AP002907.1-201ENST00000606361 1430 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AL139811.1-201ENST00000424779 2299 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 TEX21P-201ENST00000447107 1476 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 EIF2AP4-201ENST00000424793 1781 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 RNU6-1215P-201ENST00000384441 102 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 RNU2-66P-201ENST00000410650 161 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 UBE2V1P10-201ENST00000414685 269 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 EIF1P3-201ENST00000423841 334 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AL138785.1-201ENST00000425821 331 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 RPL23AP81-201ENST00000455252 467 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AC005726.1-201ENST00000494679 427 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 PARP4P3-201ENST00000510265 317 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 FABP5P5-201ENST00000515537 406 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 TRAV8-5-201ENST00000537369 341 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AL133457.1-201ENST00000564251 987 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AC005771.1-201ENST00000585581 349 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 VN1R85P-201ENST00000601587 426 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 BNIP3P11-201ENST00000603878 563 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AC027807.2-201ENST00000616099 408 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 ZYXP1-201ENST00000617638 118 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 MIR4727-201ENST00000622232 55 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AC008785.1-201ENST00000624475 456 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 AL603839.4-201ENST00000624658 1005 ntBASIC4.38□□□□□ -1.71
USP29Q9HBJ7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP29Q9HBJ7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP29Q9HBJ7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP29Q9HBJ7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
USP29Q9HBJ7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
USP29Q9HBJ7 RNA5SP515-201ENST00000364570 118 ntBASIC4.37□□□□□ -1.71
USP29Q9HBJ7 RNU1-64P-201ENST00000365443 163 ntBASIC4.37□□□□□ -1.71
USP29Q9HBJ7 EIF5P1-201ENST00000400019 1231 ntBASIC4.37□□□□□ -1.71
USP29Q9HBJ7 DHFRP6-201ENST00000401776 268 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms