Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC140076.1-201ENST00000449897 361 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC010468.1-201ENST00000461022 817 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 RPL31P13-201ENST00000484151 370 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC108078.3-201ENST00000502633 489 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC010374.2-201ENST00000512933 535 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AP001207.2-201ENST00000519490 539 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 OR8L1P-201ENST00000534005 955 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC027104.1-201ENST00000563702 681 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC006116.7-201ENST00000590141 756 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC021851.1-201ENST00000608537 1082 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 VN1R9P-201ENST00000614184 867 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 RMST_10.1-201ENST00000616309 154 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC073476.4-201ENST00000628409 72 ntBASIC3.33□□□□□ -1.88
NXF3Q9H4D5 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.33□□□□□ -1.88
NXF3Q9H4D5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC073325.2-201ENST00000339545 159 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 MIR22-201ENST00000362190 85 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 MIR607-201ENST00000385241 96 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 RPL7P25-201ENST00000404151 721 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 ATF1P1-201ENST00000406040 927 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AL445183.3-201ENST00000414168 502 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC008173.1-201ENST00000418901 264 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 MTND2P16-201ENST00000419987 799 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 RPL7L1P13-201ENST00000511702 739 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC093755.1-201ENST00000512950 1023 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 MTCO3P27-201ENST00000514397 196 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 RN7SKP272-201ENST00000516988 232 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AP003355.1-201ENST00000518956 587 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 SERPINE4P-201ENST00000554978 281 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 LARP7P3-201ENST00000579888 337 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC133794.1-201ENST00000602731 914 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC011468.4-201ENST00000603942 409 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 BNIP3P31-201ENST00000604515 566 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AL033523.1-201ENST00000605153 153 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC093732.2-201ENST00000607950 274 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AP005229.2-201ENST00000609980 697 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AL359535.1-201ENST00000612100 1087 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC008759.3-201ENST00000613300 508 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 PLCE1P1-201ENST00000622094 305 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC092184.1-201ENST00000625042 715 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 U6.107-201ENST00000637108 79 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 MTCO1P18-201ENST00000455518 1419 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 AC005183.1-201ENST00000603687 1979 ntBASIC3.32□□□□□ -1.88
NXF3Q9H4D5 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NXF3Q9H4D5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 SEC63P2-201ENST00000503863 1939 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 RPL7P26-201ENST00000333817 754 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 RNU6-354P-201ENST00000383862 107 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 RNU6-610P-201ENST00000384264 107 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 SKINT1L-201ENST00000401057 817 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 MTCO3P31-201ENST00000405526 789 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 COTL1P1-201ENST00000422309 375 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 RPS6P14-201ENST00000425165 719 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC093422.3-201ENST00000428506 305 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC068135.1-201ENST00000446164 246 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC117440.1-201ENST00000474107 571 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 RPS29P26-201ENST00000477483 171 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC126121.1-201ENST00000482313 553 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC068724.1-201ENST00000487100 792 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC096576.1-201ENST00000489014 359 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 7.2 ms