Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 RNA5SP258-201ENST00000362750 119 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 RNA5SP97-201ENST00000365006 84 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 U1.1-201ENST00000384101 164 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 MIR199A2-201ENST00000385289 110 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 RNU6-821P-201ENST00000390995 107 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 HLFP1-201ENST00000402375 499 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 Z98941.1-201ENST00000407764 100 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 RPS3AP25-201ENST00000411660 793 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC012065.2-201ENST00000421295 375 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 GLRXP1-201ENST00000423261 334 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 RANP8-201ENST00000444720 713 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 RPS15AP17-201ENST00000470598 390 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 PPIAP15-201ENST00000479662 484 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 XKRY-201ENST00000510392 1100 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 RN7SKP265-201ENST00000516448 223 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 RNU6-352P-201ENST00000516908 107 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 SNORA31.20-201ENST00000517111 133 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC104986.1-201ENST00000517978 436 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 MED28P5-201ENST00000528254 438 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC010198.2-201ENST00000550612 259 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC090877.1-201ENST00000561418 344 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC034105.4-201ENST00000568304 277 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC061975.8-201ENST00000587058 721 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC090425.2-201ENST00000608818 501 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC034229.5-201ENST00000624258 185 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AC004925.1-201ENST00000624256 2706 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 RPS4XP5-202ENST00000449995 1334 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 OR5BR1P-201ENST00000524992 1330 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 ATP5F1P4-201ENST00000397288 746 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 RN7SKP202-201ENST00000410439 330 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AIMP1P1-201ENST00000418670 937 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 RPL23AP74-201ENST00000437246 471 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 MTND3P1-201ENST00000441336 220 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 DNAJC19P1-201ENST00000455312 319 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 RPL18AP17-201ENST00000455326 198 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AC026410.2-201ENST00000460281 156 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 RPL23AP62-201ENST00000463396 453 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 RPL7P38-201ENST00000488396 739 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 MTND4LP31-201ENST00000514859 294 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 RN7SKP289-201ENST00000517244 295 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 MTCO1P49-201ENST00000523429 802 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AC087499.8-201ENST00000578406 226 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AC128687.1-201ENST00000605304 619 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AL158042.1-201ENST00000605338 460 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 BRDTP1-201ENST00000605735 677 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AC103710.3-201ENST00000608157 948 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AC092106.3-201ENST00000611308 722 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 AC018755.4-201ENST00000619715 454 ntBASIC3.53□□□□□ -1.84
UBQLN3Q9H347 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms