Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AIMP1P1-201ENST00000418670 937 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AL158156.1-201ENST00000422509 473 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 HSFY1P1-201ENST00000423928 1178 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 RPL21P66-201ENST00000426566 466 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AL590103.1-201ENST00000434488 307 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 RPL7P59-201ENST00000447700 943 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 TRBV26-201ENST00000456572 344 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 MTCO3P35-201ENST00000485582 781 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AC108078.3-201ENST00000502633 489 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 NCAPGP2-201ENST00000557911 754 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 RPL21P12-201ENST00000559810 515 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AC073657.2-201ENST00000605661 303 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AC008759.3-201ENST00000613300 508 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 AC117529.2-201ENST00000512159 2068 ntBASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.67□□□□□ -1.82
CCSER1Q9C0I3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 RNU6-339P-201ENST00000384310 107 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 Y_RNA.493-201ENST00000384422 102 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 RNVU1-14-201ENST00000384770 164 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 GSTA8P-201ENST00000404253 637 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AL023807.1-201ENST00000407932 359 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 VDAC1P3-201ENST00000434069 851 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 RPL23AP14-201ENST00000468281 468 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 RN7SL601P-201ENST00000471221 293 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 OR5H5P-201ENST00000503164 928 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AC048346.1-201ENST00000510247 144 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 RNU1-143P-201ENST00000516296 146 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AC109635.4-202ENST00000531666 412 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AC022146.1-201ENST00000595307 847 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AC103881.1-201ENST00000603476 538 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 U1.23-201ENST00000610293 146 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AL590282.1-201ENST00000610379 1136 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AL354976.1-201ENST00000613843 387 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AL157817.1-201ENST00000614264 790 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 RNU1-68P-201ENST00000615382 146 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AC009464.1-201ENST00000615731 469 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AC253576.2-201ENST00000618815 580 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 U1.39-201ENST00000621562 146 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AC006963.1-201ENST00000624003 1052 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AC098679.5-201ENST00000624394 571 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 AL121594.5-201ENST00000631724 573 ntBASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCSER1Q9C0I3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCSER1Q9C0I3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCSER1Q9C0I3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CCSER1Q9C0I3 RPL7P26-201ENST00000333817 754 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AL133384.1-201ENST00000412744 351 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 MTCO3P12-201ENST00000416718 547 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC245291.1-201ENST00000419501 328 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC009237.2-201ENST00000421358 284 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 RPS6P14-201ENST00000425165 719 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AC005326.1-201ENST00000429197 123 ntBASIC3.65□□□□□ -1.83
CCSER1Q9C0I3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms