Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 SDAD1P1-202ENST00000524156 2051 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AL161781.1-201ENST00000354277 403 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 RNU6-853P-201ENST00000364306 107 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 RNA5SP151-201ENST00000365632 117 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 RNU6-1103P-201ENST00000384150 107 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 RNA5SP87-201ENST00000384155 118 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 U3.30-201ENST00000391308 210 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 RPL7P25-201ENST00000404151 721 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 RNU2-8P-201ENST00000410727 190 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC119751.6-201ENST00000416712 186 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC012065.2-201ENST00000421295 375 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AL590233.1-201ENST00000430017 456 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AL662791.1-201ENST00000441992 928 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 NFU1P2-201ENST00000448700 469 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 RPL7P15-201ENST00000461190 712 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 RPL23AP65-201ENST00000475608 468 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 RBM43P1-201ENST00000476891 1081 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC093767.1-201ENST00000504523 156 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC108475.1-201ENST00000507880 950 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC021006.3-201ENST00000530771 192 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AL121579.1-201ENST00000555129 305 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 PARP1P2-201ENST00000556806 195 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 MTND6P33-201ENST00000571794 183 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC053481.3-201ENST00000577881 843 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC009268.2-201ENST00000621925 457 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC010149.2-201ENST00000637608 315 ntBASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
AMBRA1Q9C0C7 PHKBP1-201ENST00000450951 1951 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AL136164.3-201ENST00000624429 3978 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AC000123.3-201ENST00000624029 4975 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 RNU1-32P-201ENST00000363937 159 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 RN7SKP224-201ENST00000364140 325 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 Y_RNA.303-201ENST00000364998 94 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 RNU6-730P-201ENST00000383954 104 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 Y_RNA.402-201ENST00000383972 102 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 RNU1-82P-201ENST00000390851 165 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 RPL31P1-201ENST00000398116 372 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 MRPL42P2-201ENST00000403169 426 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AL160275.2-201ENST00000412010 394 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 CCDC58P2-201ENST00000417131 366 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 CBX1P1-201ENST00000440184 427 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AL671855.1-201ENST00000446875 1203 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AC079448.1-201ENST00000449377 373 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 SLC25A18P1-201ENST00000449385 454 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 FABP3P2-201ENST00000453169 399 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 HMGB1P15-201ENST00000453854 435 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AC091153.1-201ENST00000466297 402 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 RN7SL354P-201ENST00000469282 294 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AC008897.1-201ENST00000494006 347 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 RNF138P1-201ENST00000502765 546 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AC114967.1-201ENST00000504890 259 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 ARL4AP2-201ENST00000507378 601 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AC133555.2-201ENST00000550213 292 ntBASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.34□□□□□ -1.71
AMBRA1Q9C0C7 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms