Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 OR4G11P-201ENST00000492842 939 ntBASIC3.75□□□□□ -1.81
SCAPERQ9BY12 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SCAPERQ9BY12 AC008716.1-201ENST00000511084 513 ntBASIC3.75□□□□□ -1.81
SCAPERQ9BY12 RNA5SP309-201ENST00000516670 106 ntBASIC3.75□□□□□ -1.81
SCAPERQ9BY12 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.75□□□□□ -1.81
SCAPERQ9BY12 AC004925.1-201ENST00000624256 2706 ntBASIC3.75□□□□□ -1.81
SCAPERQ9BY12 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SCAPERQ9BY12 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SCAPERQ9BY12 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SCAPERQ9BY12 AL512633.1-201ENST00000399931 655 ntBASIC3.74□□□□□ -1.81
SCAPERQ9BY12 ATP5F1P6-201ENST00000402768 767 ntBASIC3.74□□□□□ -1.81
SCAPERQ9BY12 RNA5SP281-201ENST00000516504 135 ntBASIC3.74□□□□□ -1.81
SCAPERQ9BY12 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SCAPERQ9BY12 RANP3-201ENST00000530970 276 ntBASIC3.74□□□□□ -1.81
SCAPERQ9BY12 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.74□□□□□ -1.81
SCAPERQ9BY12 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.74□□□□□ -1.81
SCAPERQ9BY12 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SCAPERQ9BY12 AC012119.1-201ENST00000603184 222 ntBASIC3.74□□□□□ -1.81
SCAPERQ9BY12 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.74□□□□□ -1.81
SCAPERQ9BY12 AC046143.2-201ENST00000609789 160 ntBASIC3.74□□□□□ -1.81
SCAPERQ9BY12 NF1P10-201ENST00000613227 742 ntBASIC3.74□□□□□ -1.81
SCAPERQ9BY12 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
SCAPERQ9BY12 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SCAPERQ9BY12 AL024474.1-201ENST00000404655 591 ntBASIC3.73□□□□□ -1.81
SCAPERQ9BY12 AL034379.1-201ENST00000423216 253 ntBASIC3.73□□□□□ -1.81
SCAPERQ9BY12 RPL23AP45-201ENST00000476406 468 ntBASIC3.73□□□□□ -1.81
SCAPERQ9BY12 RPL23AP84-201ENST00000571193 464 ntBASIC3.73□□□□□ -1.81
SCAPERQ9BY12 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SCAPERQ9BY12 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.73□□□□□ -1.81
SCAPERQ9BY12 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.73□□□□□ -1.81
SCAPERQ9BY12 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
SCAPERQ9BY12 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.72□□□□□ -1.81
SCAPERQ9BY12 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.72□□□□□ -1.81
SCAPERQ9BY12 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.72□□□□□ -1.81
SCAPERQ9BY12 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
SCAPERQ9BY12 RPL36AP51-201ENST00000487216 318 ntBASIC3.72□□□□□ -1.81
SCAPERQ9BY12 RPL9P6-201ENST00000492764 598 ntBASIC3.72□□□□□ -1.81
SCAPERQ9BY12 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.72□□□□□ -1.81
SCAPERQ9BY12 AP001317.1-201ENST00000531194 960 ntBASIC3.72□□□□□ -1.81
SCAPERQ9BY12 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.72□□□□□ -1.81
SCAPERQ9BY12 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.72□□□□□ -1.81
SCAPERQ9BY12 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.72□□□□□ -1.81
SCAPERQ9BY12 AC068313.1-201ENST00000604028 1008 ntBASIC3.72□□□□□ -1.81
SCAPERQ9BY12 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.72□□□□□ -1.81
SCAPERQ9BY12 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.72□□□□□ -1.81
SCAPERQ9BY12 RNU6-253P-201ENST00000384730 105 ntBASIC3.71□□□□□ -1.82
SCAPERQ9BY12 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SCAPERQ9BY12 GSTA11P-201ENST00000452866 669 ntBASIC3.71□□□□□ -1.82
SCAPERQ9BY12 HMGN2P23-201ENST00000456759 269 ntBASIC3.71□□□□□ -1.82
SCAPERQ9BY12 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC3.71□□□□□ -1.82
SCAPERQ9BY12 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.71□□□□□ -1.82
SCAPERQ9BY12 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SCAPERQ9BY12 AC104454.1-201ENST00000421341 1401 ntBASIC3.71□□□□□ -1.82
SCAPERQ9BY12 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SCAPERQ9BY12 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.71□□□□□ -1.82
SCAPERQ9BY12 RNU1-100P-201ENST00000365255 165 ntBASIC3.7□□□□□ -1.82
SCAPERQ9BY12 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 TRGV5P-201ENST00000419915 354 ntBASIC3.7□□□□□ -1.82
SCAPERQ9BY12 ST13P20-201ENST00000447996 1065 ntBASIC3.7□□□□□ -1.82
SCAPERQ9BY12 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 MTCO3P13-201ENST00000577757 781 ntBASIC3.7□□□□□ -1.82
SCAPERQ9BY12 AC004696.1-201ENST00000614345 607 ntBASIC3.7□□□□□ -1.82
SCAPERQ9BY12 AC073348.1-201ENST00000623002 331 ntBASIC3.7□□□□□ -1.82
SCAPERQ9BY12 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 RPS27P5-201ENST00000444247 244 ntBASIC3.7□□□□□ -1.82
SCAPERQ9BY12 RPL23AP11-201ENST00000475260 469 ntBASIC3.7□□□□□ -1.82
SCAPERQ9BY12 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 AC021269.2-201ENST00000532318 330 ntBASIC3.7□□□□□ -1.82
SCAPERQ9BY12 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 AC074029.1-201ENST00000552531 1044 ntBASIC3.7□□□□□ -1.82
SCAPERQ9BY12 AC123768.4-201ENST00000616244 701 ntBASIC3.7□□□□□ -1.82
SCAPERQ9BY12 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.7□□□□□ -1.82
SCAPERQ9BY12 AC092881.1-201ENST00000638218 2733 ntBASIC3.69□□□□□ -1.82
SCAPERQ9BY12 AC117529.2-201ENST00000512159 2068 ntBASIC3.69□□□□□ -1.82
SCAPERQ9BY12 Y_RNA.238-201ENST00000364441 102 ntBASIC3.69□□□□□ -1.82
SCAPERQ9BY12 AL031736.2-201ENST00000426573 787 ntBASIC3.69□□□□□ -1.82
SCAPERQ9BY12 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.69□□□□□ -1.82
SCAPERQ9BY12 AC091179.1-201ENST00000461606 579 ntBASIC3.69□□□□□ -1.82
SCAPERQ9BY12 AC087385.1-201ENST00000475062 312 ntBASIC3.69□□□□□ -1.82
SCAPERQ9BY12 RN7SL499P-201ENST00000481141 276 ntBASIC3.69□□□□□ -1.82
SCAPERQ9BY12 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.69□□□□□ -1.82
SCAPERQ9BY12 AP001207.1-201ENST00000524051 481 ntBASIC3.69□□□□□ -1.82
SCAPERQ9BY12 OR4A45P-201ENST00000529954 901 ntBASIC3.69□□□□□ -1.82
SCAPERQ9BY12 AC012531.5-201ENST00000611375 151 ntBASIC3.69□□□□□ -1.82
SCAPERQ9BY12 AL136981.2-201ENST00000617319 734 ntBASIC3.69□□□□□ -1.82
SCAPERQ9BY12 XIST_intron.1-201ENST00000619444 68 ntBASIC3.69□□□□□ -1.82
SCAPERQ9BY12 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.69□□□□□ -1.82
SCAPERQ9BY12 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms