Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 SNORD113-6-201ENST00000363345 75 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 Y_RNA.192-201ENST00000363977 102 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 RNA5SP189-201ENST00000364920 115 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 RNU6-444P-201ENST00000383988 108 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 SNORA70E-201ENST00000384492 135 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AL049545.1-201ENST00000401856 572 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 FABP12P1-201ENST00000401911 322 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AL008987.1-201ENST00000415528 237 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 OR8F1P-201ENST00000425243 930 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 RPL23AP82-202ENST00000427528 469 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 USP9YP11-201ENST00000427537 717 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 OR2AS1P-201ENST00000427827 319 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC241584.1-201ENST00000438469 1241 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 MTND1P26-201ENST00000440488 538 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 RPL23AP76-201ENST00000441860 458 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 Z77249.1-201ENST00000444622 1175 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 NF1P3-201ENST00000457709 450 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 RPL7P19-201ENST00000469948 618 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 RN7SL459P-201ENST00000481078 302 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 KLRA1P-201ENST00000503499 986 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC008837.2-201ENST00000513076 418 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 RNU6-202P-201ENST00000515998 96 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 RNU6-1225P-201ENST00000516336 65 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 ARL2BPP5-201ENST00000523141 481 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 IGKV2D-19-201ENST00000523346 262 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC005832.3-201ENST00000537929 631 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC010198.2-201ENST00000550612 259 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC051619.2-201ENST00000559063 397 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 GTF2IP8-201ENST00000560687 584 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC009094.1-201ENST00000564443 426 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 MIR4284-201ENST00000578924 81 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 KPNA2P3-201ENST00000584190 848 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 VN1R78P-201ENST00000597393 564 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 DPRXP5-201ENST00000604662 539 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 SNORA51-201ENST00000606420 132 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 MIR6864-201ENST00000617935 70 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC026634.1-201ENST00000634369 198 ntBASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC28BQ9BUN5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 SNORA51.4-201ENST00000364993 124 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 MIR153-1-201ENST00000384914 90 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AP000567.1-201ENST00000406413 156 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 RN7SKP123-201ENST00000410732 291 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 RN7SKP53-201ENST00000411337 315 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC009237.2-201ENST00000421358 284 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AL139247.1-201ENST00000422768 325 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 RPL23AP69-201ENST00000431134 458 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AL513175.1-201ENST00000431492 780 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC010881.1-201ENST00000433830 235 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC244505.4-201ENST00000434905 287 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 SSXP5-201ENST00000443473 287 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 RPS26P56-201ENST00000444468 240 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 RPL21P134-201ENST00000453468 483 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AL133162.1-201ENST00000463228 453 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC093663.1-201ENST00000497190 394 ntBASIC3.41□□□□□ -1.86
CCDC28BQ9BUN5 AC091951.3-201ENST00000504093 246 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms