Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.59□□□□□ -1.67
NDC1Q9BTX1 AL359212.1-201ENST00000556608 614 ntBASIC4.59□□□□□ -1.67
NDC1Q9BTX1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NDC1Q9BTX1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.59□□□□□ -1.67
NDC1Q9BTX1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NDC1Q9BTX1 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.59□□□□□ -1.67
NDC1Q9BTX1 AC010928.1-201ENST00000592477 1447 ntBASIC4.59□□□□□ -1.67
NDC1Q9BTX1 AC234771.5-201ENST00000600161 514 ntBASIC4.59□□□□□ -1.67
NDC1Q9BTX1 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.59□□□□□ -1.67
NDC1Q9BTX1 MIR378J-201ENST00000611988 109 ntBASIC4.59□□□□□ -1.67
NDC1Q9BTX1 AC009318.4-201ENST00000620496 486 ntBASIC4.59□□□□□ -1.67
NDC1Q9BTX1 AC010338.1-201ENST00000621823 717 ntBASIC4.59□□□□□ -1.67
NDC1Q9BTX1 AC015871.5-202ENST00000623252 701 ntBASIC4.59□□□□□ -1.67
NDC1Q9BTX1 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
NDC1Q9BTX1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
NDC1Q9BTX1 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 RNU6-398P-201ENST00000384143 109 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 MT-TD-201ENST00000387419 68 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 U3.30-201ENST00000391308 210 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AL359643.1-201ENST00000404109 423 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AL603766.1-201ENST00000407763 664 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 RNU2-21P-201ENST00000410368 188 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 RNU2-8P-201ENST00000410727 190 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AL359704.1-201ENST00000411586 781 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 RPL31P45-201ENST00000419532 356 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC092017.2-201ENST00000427600 362 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 RPS17P8-201ENST00000434525 335 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AL451139.1-201ENST00000434718 346 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AL353597.2-202ENST00000434901 373 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC104850.1-201ENST00000435940 476 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC016831.4-201ENST00000438302 307 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 RPL23AP20-201ENST00000447965 421 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 HMGB1P15-201ENST00000453854 435 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 RPS20P32-201ENST00000456044 356 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 PMCHL2-203ENST00000457791 237 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC022364.2-201ENST00000457963 554 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 RN7SL481P-201ENST00000477764 299 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC093267.1-201ENST00000489176 961 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 RNA5SP392-201ENST00000516905 112 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 RNU6-201P-201ENST00000517100 61 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 OR5AN2P-201ENST00000534535 896 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 CBX3P5-201ENST00000552017 521 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC011468.4-201ENST00000603942 409 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AL035413.2-201ENST00000604801 525 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 MIR98-201ENST00000606724 119 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AL022401.1-201ENST00000619498 108 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 MIR6853-201ENST00000619642 74 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AP000346.3-201ENST00000622821 210 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC010149.2-201ENST00000637608 315 ntBASIC4.58□□□□□ -1.68
NDC1Q9BTX1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NDC1Q9BTX1 AC092447.10-201ENST00000620607 1652 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC024560.2-201ENST00000507981 1497 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 SCN1A-220ENST00000641603 12506 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 OR5J1P-201ENST00000313544 939 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 Y_RNA.263-201ENST00000364659 114 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 RNU6-878P-201ENST00000384578 110 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 RNU6-146P-201ENST00000384602 108 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 snosnR66.1-201ENST00000391095 99 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 RPL31P1-201ENST00000398116 372 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 MRPL42P2-201ENST00000403169 426 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 RAB28P1-201ENST00000411517 641 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC127391.1-201ENST00000411737 98 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AC012065.2-201ENST00000421295 375 ntBASIC4.57□□□□□ -1.68
NDC1Q9BTX1 AL353193.1-201ENST00000421444 268 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms