Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AP000942.1-201ENST00000463969 747 ntBASIC2.24□□□□□ -2.05
USP9XQ93008 RPL31P41-201ENST00000477967 372 ntBASIC2.24□□□□□ -2.05
USP9XQ93008 AC068587.2-201ENST00000478386 781 ntBASIC2.24□□□□□ -2.05
USP9XQ93008 AC011604.1-201ENST00000545978 196 ntBASIC2.24□□□□□ -2.05
USP9XQ93008 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.24□□□□□ -2.05
USP9XQ93008 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.24□□□□□ -2.05
USP9XQ93008 U4.3-201ENST00000621047 82 ntBASIC2.24□□□□□ -2.05
USP9XQ93008 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
USP9XQ93008 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
USP9XQ93008 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
USP9XQ93008 GLRXP1-201ENST00000423261 334 ntBASIC2.23□□□□□ -2.05
USP9XQ93008 MTND3P6-201ENST00000485242 339 ntBASIC2.23□□□□□ -2.05
USP9XQ93008 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.23□□□□□ -2.05
USP9XQ93008 AC025881.1-201ENST00000518851 512 ntBASIC2.23□□□□□ -2.05
USP9XQ93008 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.23□□□□□ -2.05
USP9XQ93008 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.23□□□□□ -2.05
USP9XQ93008 AP000275.1-201ENST00000411943 390 ntBASIC2.23□□□□□ -2.05
USP9XQ93008 ST13P20-201ENST00000447996 1065 ntBASIC2.23□□□□□ -2.05
USP9XQ93008 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.23□□□□□ -2.05
USP9XQ93008 TRBV26-201ENST00000456572 344 ntBASIC2.23□□□□□ -2.05
USP9XQ93008 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.23□□□□□ -2.05
USP9XQ93008 RNU6-295P-201ENST00000516901 104 ntBASIC2.23□□□□□ -2.05
USP9XQ93008 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.23□□□□□ -2.05
USP9XQ93008 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
USP9XQ93008 AC234775.3-201ENST00000564612 656 ntBASIC2.23□□□□□ -2.05
USP9XQ93008 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.23□□□□□ -2.05
USP9XQ93008 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.23□□□□□ -2.05
USP9XQ93008 AC007423.1-201ENST00000605009 627 ntBASIC2.23□□□□□ -2.05
USP9XQ93008 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
USP9XQ93008 GABPAP-201ENST00000419271 1356 ntBASIC2.23□□□□□ -2.05
USP9XQ93008 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
USP9XQ93008 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
USP9XQ93008 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USP9XQ93008 MIR137-201ENST00000385223 102 ntBASIC2.22□□□□□ -2.05
USP9XQ93008 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.22□□□□□ -2.05
USP9XQ93008 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USP9XQ93008 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.22□□□□□ -2.05
USP9XQ93008 RN7SL442P-201ENST00000473804 320 ntBASIC2.22□□□□□ -2.05
USP9XQ93008 ST13P14-201ENST00000474095 734 ntBASIC2.22□□□□□ -2.05
USP9XQ93008 HSPE1P18-201ENST00000517602 280 ntBASIC2.22□□□□□ -2.05
USP9XQ93008 AC022709.1-201ENST00000615967 87 ntBASIC2.22□□□□□ -2.05
USP9XQ93008 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.22□□□□□ -2.05
USP9XQ93008 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USP9XQ93008 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
USP9XQ93008 Z73965.1-201ENST00000623412 2297 ntBASIC2.22□□□□□ -2.05
USP9XQ93008 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USP9XQ93008 U3.6-201ENST00000363622 211 ntBASIC2.22□□□□□ -2.05
USP9XQ93008 AC245291.1-201ENST00000419501 328 ntBASIC2.22□□□□□ -2.05
USP9XQ93008 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.22□□□□□ -2.05
USP9XQ93008 AC011816.1-201ENST00000441346 546 ntBASIC2.22□□□□□ -2.05
USP9XQ93008 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.22□□□□□ -2.05
USP9XQ93008 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.22□□□□□ -2.05
USP9XQ93008 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.22□□□□□ -2.05
USP9XQ93008 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
USP9XQ93008 AC008507.1-201ENST00000587506 734 ntBASIC2.22□□□□□ -2.05
USP9XQ93008 AL031274.2-201ENST00000599419 203 ntBASIC2.22□□□□□ -2.05
USP9XQ93008 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
USP9XQ93008 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
USP9XQ93008 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.22□□□□□ -2.05
USP9XQ93008 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.22□□□□□ -2.05
USP9XQ93008 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.22□□□□□ -2.05
USP9XQ93008 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USP9XQ93008 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
USP9XQ93008 AC087565.3-202ENST00000642085 1603 ntBASIC2.21□□□□□ -2.05
USP9XQ93008 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.05
USP9XQ93008 AL606537.1-201ENST00000607258 2011 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 RNU6-37P-201ENST00000362692 107 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 RNU6-11P-201ENST00000364234 107 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
USP9XQ93008 Y_RNA.433-201ENST00000384089 102 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 EI24P2-201ENST00000397776 1076 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 AC098934.3-201ENST00000430450 190 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 AC006539.3-201ENST00000454258 129 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 ARL2BPP6-201ENST00000512757 439 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.21□□□□□ -2.06
USP9XQ93008 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.21□□□□□ -2.06
USP9XQ93008 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.21□□□□□ -2.06
USP9XQ93008 AC090115.4-201ENST00000609970 188 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 CR381653.2-201ENST00000624041 768 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
USP9XQ93008 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
USP9XQ93008 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
USP9XQ93008 Y_RNA.354-201ENST00000365448 111 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 MIR598-201ENST00000384868 97 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 RNA5SP107-201ENST00000411358 122 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 AC007064.1-201ENST00000412238 351 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.21□□□□□ -2.06
USP9XQ93008 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC2.21□□□□□ -2.06
USP9XQ93008 MTCO3P11-201ENST00000455103 774 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.21□□□□□ -2.06
USP9XQ93008 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.21□□□□□ -2.06
USP9XQ93008 AC141257.3-201ENST00000572906 215 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.21□□□□□ -2.06
USP9XQ93008 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.21□□□□□ -2.06
USP9XQ93008 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USP9XQ93008 DDX10P1-201ENST00000448545 1933 ntBASIC2.21□□□□□ -2.06
USP9XQ93008 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USP9XQ93008 AC245054.2-201ENST00000415639 319 ntBASIC2.2□□□□□ -2.06
USP9XQ93008 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.2□□□□□ -2.06
USP9XQ93008 AC108078.3-201ENST00000502633 489 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms